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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS47289.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
47289.1 |
Public |
Homo sapiens |
5 |
PCDHGA2 |
24 |
110 |
108 |
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Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 47289.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENST00000394576.3 |
ENSP00000378077.2 |
MANE Select |
Accepted |
alive |
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NCBI |
NM_018915.4 |
NP_061738.1 |
MANE Select |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_061738.1 |
932 |
Q9Y5H1-1 |
932 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 47289.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (2799 nt): ATGGCGGCTCTGCAAAAGTTGCCACACTGCAGAAAGCTGGTCCTGCTGTGCTTCCTTTTGGCGACCCTGT GGGAGGCCAGGGCCGGGCAGATTCGCTATTCTGTGCGGGAAGAGATCGACAGAGGCTCCTTCGTAGGCAA CATCGCCAAGGACTTGGGTTTGGAGCCCCTGGCACTGGCAGAGCAGGGAGTCCGCATCGTCTCCAGAGGT AGGTCCCAGCTCTTTGCTCTGAACCCGCGAAGCGGCAGCTTGGTCACTGCGAACAGGATAGACCGGGAGG AGCTCTGCGCTCAGAGCGCACCCTGTCTGTTGAATTTTAACATTCTGCTGGAGGATAAATTGACTATTTA TTCAGTAGAGGTGGAAATAACAGATATTAACGATAATGCCCCTCGCTTTGGAGTAGAGGAACTGGAGCTA AAAATCAGTGAAACCACTACGCCAGGATTCCGGATTCCTCTTAAGAATGCGCATGATGCAGACGTAGGTG AGAACGCCCTTCAGAAGTACGCACTCAACCCAAATGACCACTTCTCCCTGGACGTGCGAAGGGGAGCTGA TGGGAACAAGTACCCAGAACTGGTGCTGGAGCGCTCTCTGGACCGCGAGGAAGAGGCTGTTCACCACCTC GTTCTCGTGGCTTCTGATGGGGGTGACCCAGTGCTATCTGGCACCTCCCGCATCTGCGTGAAGGTCCTGG ATGCGAACGACAATGCGCCTGTTTTTACACAGCCCGAGTACCGCATAAGCATTCCGGAGAATACGCTCGT GGGCACCCGGATACTCACGGTGACCGCCACTGACGCAGATGAGGGCTACTACGCTCAAGTGGTATATTTT CTAGAGAAAAGCCCTGGAGAAACCTCAGAGGTATTTGAGCTTAAGTCAACATCTGGAGAACTGACAATCA TAAAAGATCTAGATTATGAGGATGCTACATTCCATGAAATTGATATTGAAGCTCAGGATGGTCCGGGCCT TCTAACCAGAGCGAAGGTTATCGTCACGGTTCTGGATGTGAATGACAATGCCCCAGAATTTTACATGACA TCTGCTACTAGCTCAGTTTCTGAAGACTCTCTTCCAGGAACCATAATTGGGCTTTTTAATGTACATGATA GAGACTCTGGGCAGAACGCATTCACCACCTGTTCACTCCCCGAGGATCTTCCTTTTAAGTTAGAAAAGTC AGTAGACAATTACTACCGACTGGTTACAACCAGAGCCCTTGACAGGGAACAGTTTTCCTTTTACAACATC ACTCTAACCGCTAAAGATGGAGGGAACCCCTCCCTGTCCACGGATGCTCACATTTTGCTCCAGGTGGCAG ACATCAACGACAACGCACCCGCCTTCTCCCGCACATCCTACTCCACCTACATTCCCGAAAACAACCCCAG AGGAGCCTCTGTCTTCTCAGTGACGGCCCATGACCCCGACAGCAACGACAATGCTCATGTAACTTACTCT TTCGCGGAGGACACTGTTCAGGGGGCACCCTTATCCTCTTACATCTCTATCAACTCCGACACTGGAGTAC TCTATGCACTGCGCTCCTTTGATTATGAGCAGTTGCGAGACTTGCAAGTGTGGGTGATAGCGCGGGACAG CGGGAACCCTCCACTCAGTAGCAATGTATCATTAAGCCTGTTCGTGCTGGACCAGAACGACAACGCGCCC GAGATCCTGTACCCTGCCTTCCCCACAGACGGTTCCACTGGCGTGGAGCTGGCGCCCCGCTCCGCAGAGC CCGGCTACCTGGTGACCAAGGTGGTGGCGGTGGACAGAGACTCGGGCCAGAACGCCTGGCTGTCTTACCA CCTGCTCAAGGCCAGCGAGCCGGGACTCTTCTCGGTGGGTCTGCACACGGGCGAGGTGCGCACGGCGCGA GCCCTGCTGGACAGAGACGCGCTCAAGCAGAGCCTCGTGGTGGCCATCCAGGACCACGGCCAGCCCCCTC TCTCCGCCACTGTCACGCTCACCGTGGCCGTGGCCGACAGGATCCCCGACATCCTGGCCGACCTGGGCAG CCTCGAGCCCTCCGCCATACCCAACGATTCGGACCTCACTCTGTACCTGGTGGTGGCGGTGGCCGCGGTC TCCTGCGTCTTCCTGGCCTTCGTCATCGTGTTGCTGGCGCACAGGCTGCGGCGCTGGCACAAGTCACGCC TGCTGCAGGCTTCAGGAGGCAGCTTGACAGGCATGCAGAGCTCGCACTTTGTGGGCGTGGACGGGGTTCG GGCTTTCCTGCAGACCTATTCCCACGAGGTCTCCCTCACTGCGGACTCGCGGAAGAGCCACCTGATTTTC CCCCAGCCCAACTATGCGGACACGCTCATCAGCCAGGAGAGCTGTGAGAAAAAGGATTTTTTATCAGCGC CTCAATCTCTACTCGAAGAAGAAAGAGAAGAAACGTTTTCTCAGCAAGCCCCGCCCAACACGGACTGGCG TTTCTCTCAGGCCCAGAGACCCGGCACCAGCGGCTCCCAAAATGGCGATGACACCGGCACCTGGCCCAAC AACCAGTTTGACACAGAGATGCTGCAAGCCATGATCTTGGCGTCCGCCAGTGAAGCTGCTGATGGGAGCT CCACCCTGGGAGGGGGTGCCGGCACCATGGGATTGAGCGCCCGCTACGGACCCCAGTTCACCCTGCAGCA CGTGCCCGACTACCGCCAGAATGTCTACATCCCAGGCAGCAATGCCACACTGACCAACGCAGCTGGCAAG CGGGATGGCAAGGCCCCAGCAGGTGGCAATGGCAACAAGAAGAAGTCGGGCAAGAAGGAGAAGAAGTAA
Translation (932 aa): MAALQKLPHCRKLVLLCFLLATLWEARAGQIRYSVREEIDRGSFVGNIAKDLGLEPLALAEQGVRIVSRG RSQLFALNPRSGSLVTANRIDREELCAQSAPCLLNFNILLEDKLTIYSVEVEITDINDNAPRFGVEELEL KISETTTPGFRIPLKNAHDADVGENALQKYALNPNDHFSLDVRRGADGNKYPELVLERSLDREEEAVHHL VLVASDGGDPVLSGTSRICVKVLDANDNAPVFTQPEYRISIPENTLVGTRILTVTATDADEGYYAQVVYF LEKSPGETSEVFELKSTSGELTIIKDLDYEDATFHEIDIEAQDGPGLLTRAKVIVTVLDVNDNAPEFYMT SATSSVSEDSLPGTIIGLFNVHDRDSGQNAFTTCSLPEDLPFKLEKSVDNYYRLVTTRALDREQFSFYNI TLTAKDGGNPSLSTDAHILLQVADINDNAPAFSRTSYSTYIPENNPRGASVFSVTAHDPDSNDNAHVTYS FAEDTVQGAPLSSYISINSDTGVLYALRSFDYEQLRDLQVWVIARDSGNPPLSSNVSLSLFVLDQNDNAP EILYPAFPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQNAWLSYHLLKASEPGLFSVGLHTGEVRTAR ALLDRDALKQSLVVAIQDHGQPPLSATVTLTVAVADRIPDILADLGSLEPSAIPNDSDLTLYLVVAVAAV SCVFLAFVIVLLAHRLRRWHKSRLLQASGGSLTGMQSSHFVGVDGVRAFLQTYSHEVSLTADSRKSHLIF PQPNYADTLISQESCEKKDFLSAPQSLLEEEREETFSQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGSNATLTNAAGK RDGKAPAGGNGNKKKSGKKEKK
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