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Report for CCDS10533.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10533.2 Public Homo sapiens 16 METTL22 24 110 108 CCDS HistoryNCBI Gene:79091Re-query CCDS DB by CCDS ID:10533.2Re-query CCDS DB by GeneID:79091See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 10533.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000381920.8 ENSP00000371345.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000381920.8Link to Ensembl Protein Viewer:ENSP00000371345.3Re-query CCDS DB by Nucleotide ID:ENST00000381920Re-query CCDS DB by Protein ID:ENSP00000371345
Original member Current member NCBI NM_024109.4 NP_077014.4 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024109.4Link to Protein Sequence:NP_077014.4Re-query CCDS DB by Nucleotide ID:NM_024109Re-query CCDS DB by Protein ID:NP_077014Link to BLAST:NP_077014.4

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_077014.4 404 Q9BUU2-1 404 100% 0 0

Chromosomal Locations for CCDS 10533.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 8625666 8625798 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8628730 8629110 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8635039 8635079 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8635168 8635312 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8639091 8639162 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8641131 8641184 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8642127 8642207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8642463 8642565 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8644557 8644725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 8646108 8646143 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1215 nt):
ATGGTACAGCTGGCTCCTGCGGCAGCCATGGACGAGGTCACCTTTAGGAGCGACACTGTGCTGTCAGATG
TCCACCTCTATACCCCGAACCATAGACATCTCATGGTACGGCTGAACAGCGTGGGGCAGCCAGTTTTCCT
GTCCCAATTCAAGCTTCTATGGAGCCAAGACTCTTGGACAGATTCAGGAGCCAAGGGTGGCAGTCACAGA
GATGTTCACACAAAGGAGCCTCCTTCTGCTGAGACAGGCAGCACAGGGTCCCCTCCAGGAAGTGGCCATG
GTAATGAGGGTTTCTCCCTCCAGGCCGGGACTGACACCACTGGCCAGGAAGTGGCTGAAGCTCAGCTGGA
TGAGGATGGGGATTTGGACGTGGTGAGAAGACCACGAGCCGCCTCTGATTCCAACCCAGCAGGGCCTCTG
AGAGACAAGGTACATCCCATGATTCTAGCACAGGAAGAAGACGACGTCCTGGGAGAGGAAGCACAAGGCA
GCCCGCACGATATCATCAGAATAGAGCACACCATGGCCACGCCCCTGGAGGATGTTGGCAAGCAGGTGTG
GCGGGGCGCCCTGCTCCTGGCAGACTACATCCTGTTCCGACAGGACCTCTTCCGAGGATGTACAGCGCTG
GAGCTCGGGGCCGGCACGGGGCTCGCTAGCATCATCGCAGCCACCATGGCACGGACCGTTTATTGTACAG
ATGTCGGTGCAGATCTCTTGTCCATGTGCCAGCGAAACATTGCCCTCAACAGCCACCTGGCTGCCACTGG
AGGTGGTATAGTTAGGGTCAAAGAACTGGACTGGCTGAAGGACGACCTCTGCACAGATCCCAAGGTCCCC
TTCAGTTGGTCACAAGAGGAAATTTCTGACTTGTACGATCACACCACCATCCTGTTTGCAGCCGAAGTGT
TTTACGACGACGACTTGACTGATGCTGTGTTTAAAACGCTCTCCCGACTCGCCCACAGATTGAAAAATGC
CTGCACAGCCATACTGTCGGTGGAGAAGAGGCTCAACTTCACATTGAGACACTTGGACGTCACATGTGAA
GCCTACGATCACTTCCGCTCCTGCCTGCACGCGCTGGAGCAGCTCGCAGATGGCAAGCTGCGCTTCGTGG
TGGAGCCCGTGGAGGCCTCCTTCCCACAGCTCCTGGTTTACGAGCGCCTCCAGCAACTGGAGCTCTGGAA
GATCATCGCAGAACCAGTAACATGA

Translation (404 aa):
MVQLAPAAAMDEVTFRSDTVLSDVHLYTPNHRHLMVRLNSVGQPVFLSQFKLLWSQDSWTDSGAKGGSHR
DVHTKEPPSAETGSTGSPPGSGHGNEGFSLQAGTDTTGQEVAEAQLDEDGDLDVVRRPRAASDSNPAGPL
RDKVHPMILAQEEDDVLGEEAQGSPHDIIRIEHTMATPLEDVGKQVWRGALLLADYILFRQDLFRGCTAL
ELGAGTGLASIIAATMARTVYCTDVGADLLSMCQRNIALNSHLAATGGGIVRVKELDWLKDDLCTDPKVP
FSWSQEEISDLYDHTTILFAAEVFYDDDLTDAVFKTLSRLAHRLKNACTAILSVEKRLNFTLRHLDVTCE
AYDHFRSCLHALEQLADGKLRFVVEPVEASFPQLLVYERLQQLELWKIIAEPVT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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