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Report for CCDS42894.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
42894.1 |
Public |
Homo sapiens |
20 |
ZNF831 |
24 |
110 |
108 |
![CCDS History](IMG/ccds-History.jpg) ![](/corehtml/transparent.gif) ![NCBI Gene:128611](IMG/ccds-Gene.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by CCDS ID:42894.1](IMG/ccds-Cquery.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by GeneID:128611](IMG/ccds-Gquery.jpg) ![](/corehtml/transparent.gif) ![See the combined annotation on chromosome 20 in Sequence Viewer](IMG/ccds-SeqViewer.jpg) ![](/corehtml/transparent.gif) |
Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 42894.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
MANE |
Status in CCDS |
Seq. Status |
Links |
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![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000371030.4 |
ENSP00000360069.2 |
MANE Select |
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000371030.4](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000360069.2](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000371030](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000360069](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
EBI |
ENST00000637017.1 |
ENSP00000490240.1 |
|
Accepted |
alive |
![Link to Ensembl Transcript Viewer:ENST00000637017.1](IMG/ccds-Nucleotide.jpg) ![Link to Ensembl Protein Viewer:ENSP00000490240.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:ENST00000637017](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:ENSP00000490240](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_001384354.1 |
NP_001371283.1 |
|
Accepted |
alive |
![Link to Nucleotide Sequence:NM_001384354.1](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_001371283.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_001384354](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_001371283](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_001371283.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
![Original member](IMG/ccds-Check.jpg) |
![Current member](IMG/ccds-Check.jpg) |
NCBI |
NM_178457.3 |
NP_848552.1 |
MANE Select |
Accepted |
alive |
![Link to Nucleotide Sequence:NM_178457.3](IMG/ccds-Nucleotide.jpg) ![Link to Protein Sequence:NP_848552.1](IMG/ccds-Protein.jpg) ![](/corehtml/transparent.gif) ![Re-query CCDS DB by Nucleotide ID:NM_178457](IMG/ccds-Nquery.jpg) ![Re-query CCDS DB by Protein ID:NP_848552](IMG/ccds-Pquery.jpg) ![](/corehtml/transparent.gif) ![Link to BLAST:NP_848552.1](IMG/ccds-BLAST.jpg) ![](/corehtml/transparent.gif) |
Chromosomal Locations for CCDS 42894.1
Assembly GRCh38.p14 (GCF_000001405.40)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5034 nt): ATGGAGGTTCCAGAACCCACCTGCCCTGCCCCTCCTGCGAGGGACCAGCCAGCTCCCACTCCTGGCCCTC CAGGGGCCCCAGGTGGCCAGGCCTCACCTCACCTGACCCTGGGCCCTGTCCTTCTGCCGCCAGAGCAGGG CCTGGCCCCCCCCACTGTGTTCCTGAAGGCCCTGCCCATCCCACTGTACCACACGGTGCCTCCCGGGGGC CTCCAGCCCCGCGCCCCGCTAGTGACGGGCAGCCTAGATGGGGGCAACGTGCCCTTCATACTCAGCCCTG TGCTGCAGCCTGAAGGGCCTGGCCCCACCCAGGTGGGGAAGCCGGCGGCCCCTACGCTGACGGTGAACAT CGTGGGCACTCTGCCTGTCCTGTCGCCGGGCCTGGGCCCCACGCTGGGCAGCCCAGGCAAGGTGCGGAAT GCGGGCAAGTACCTGTGTCCGCACTGTGGTCGCGACTGCCTGAAGCCCAGTGTTCTAGAGAAGCACATCC GGTCCCACACGGGTGAGAGGCCCTTCCCGTGTGCCACCTGCGGCATCGCCTTTAAGACCCAGAGCAATCT CTACAAGCACAGGCGGACGCAGACGCACCTCAACAACTCCCGGCTGTCCTCAGAGTCCGAGGGCGCCGGG GGCGGCCTCCTGGAGGAAGGGGACAAGGCCGGAGAGCCCCCCAGACCAGAGGGCAGGGGCGAGAGCAGGT GCCAGGGGATGCACGAAGGCGCCTCGGAGAGACCCCTTTCTCCGGGTGCCCACGTGCCCCTACTTGCCAA GAACCTGGATGTGAGGACCGAAGCTGCTCCCTGTCCAGGGTCCGCATTTGCCGACAGAGAGGCTCCTTGG GACTCTGCCCCCATGGCGTCACCTGGGCTCCCAGCGGCCAGCACACAACCCTGGCGTAAGTTGCCAGAGC AGAAGTCGCCGACCGCCGGGAAGCCGTGCGCCCTGCAGCGGCAGCAGGCGACGGCAGCGGAGAAGCCCTG GGATGCCAAGGCCCCCGAGGGCCGGCTGCGGAAGTGTGAGAGCACCGACTCGGGGTACCTGTCGCGCTCC GACAGCGCGGAGCAGCCGCATGCGCCCTGCAGCCCCCTGCACAGCCTTTCGGAGCACAGCGCCGAGTCCG AGGGGGAGGGCGGCCCGGGCCCGGGGCCAGGGGTCGCAGGGGCCGAGCCCGGGGCGCGAGAAGCCGGCCT GGAGCTGGAGAAGAAGCGGCTGGAGGAGCGCATCGCCCAGCTCATCTCCCACAACCAGGCGGTGGTGGAC GATGCCCAGCTGGACAACGTGCGGCCCCGGAAGACCGGGCTGTCCAAACAGGGCAGCATCGACCTGCCCA CGCCCTACACCTACAAGGACTCCTTCCACTTTGACATCCGCGCGCTGGAGCCAGGCCGTAGGAGGGCCCC GGGCCCCGTGCGCTCCACCTGGACGCCCCCAGACAAGTCTCGGCCCCTCTTCTTCCACTCCGTCCCCACT CAGCTCTCCACCACCGTGGAATGTGTCCCCGTCACCAGGAGCAACTCGCTGCCCTTCGTCGAGGGCTCCA GGACGTGGCTGGAGCCCAGGGAGCCCCGGGACCCCTGGTCCAGGACGCAGAAGCCTCTGAGCCCCAGGCC CGGCCCAGCCCGCCTGGGCTGCCGCTCGGGACTAAGCTCGACTGACGTTCCCAGTGGGCATCCCCGGGCC CTGGTCAGACAGGCCGCGGTGGAGGACCTGCCAGGCACCCCCATTGGCGATGCCCTGGTGCCCGCAGAGG ACACAGACGCAAAGAGAACTGCTGCGCGGGAGGCCATGGCCGGCAAGGGCAGAGCGGGCGGCAGGAAGTG CGGCCAGAGAAGGCTGAAGATGTTCTCCCAGGAGAAGTGGCAGGTGTACGGGGATGAGACGTTCAAAAGG ATCTACCAGAAAATGAAAGCCAGTCCCCATGGAGGCAAGAAAGCCAGGGAGGTGGGAATGGGCAGTGGGG CAGAACTGGGCTTTCCTCTGCAGAAAGAGGCAGCAGGGAGCTCAGGCACAGTCCCCACCCAAGACAGGAG GACCCCTGTCCATGAGGACATATCCGCAGGGGCAACGCCAGAGCCTTGGGGAAATCCACCAGCCCTGGAG GCCTCCTTGGTGACTGAACCCACTAAGCATGGGGAGACGGTGGCCAGGAGAGGAGACAGTGACCGACCCA GGGTGGAAGAGGCTGTGTCATCCCCTGCACTGGGTGGCAGAGACAGTCCCTGTTCAGGCAGTAGGAGCCC CCTGGTCTCTCCAAATGGGAGGCTGGAACTGGGGTGGCAGATGCCCCCAGCACCTGGCCCCCTCAAAGGG GGTGATGTAGAGGCTCCCAGGCCAGTTTGGCCGGACCCCAAGCTGGAAGGAGGTGCCCGAGGTGTGGGGG ATGTTCAGGAGACCTGCCTGTGGGCCCAGACTGTCCTGAGATGGCCCAGCAGGGGCTCAGGGGAGGACAA GCTCCCCTCAGAGAGGAAGAAGCTGAAAGTGGAGGACCTGCACAGCTGGAAGCAACCAGAGCCTGTGAGC GCAGAGACCCCAGGTGGGCCCACGCAGCCTGCCTCTTTGTCATCCCAGAAGCAGGATGCCGATCCCGGGG AGGTGCCAGGGGGCTCAAAGGAGAGTGCCAGGCAGGTGGGCGAGCCTCTGGAGTCCTCTGGAGCCTCCTT GGCTGCTGCTTCTGTTGCCCTGAAGAGGGTGGGGCCAAGGGACAAGGCTACCCCACTGCATCCTGCAGCC CCAGCCCCCGCAGAGCACCCCTCGCTGGCCACCCCACCTCAGGCTCCTAGAGTGCTCTCTGCCCTGGCAG ATAATGCCTTTTCCCCCAAGTACCTCCTCAGGTTACCTCAGGCAGAGACCCCCTTACCACTGCCCATTCC CTGGGGACCAAGGCACAGCCAGGACTCTCTCTGCAGCAGTGGGTGGCCTGAAGAACGGGCATCATTTGTT GGGTCAGGACTGGGGACCCCTCTTTCTCCCAGCCCAGCCTCAGGCCCCTCCCCAGGTGAGGCGGACAGCA TCCTGGAGGACCCCAGCTGTTCCAGGCCACAGGATGGGAGAAAAGGGGCACAGTTGGGGGGGGACAAGGG GGACAGGATGGCCACTAGCAGGCCAGCAGCCAGGGAGTTGCCCATCTCAGCACCAGGGGCTCCCAGGGAG GCTACCTCCTCCCCGCCCACTCCAACGTGTGAGGCACACTTAGTTCAGGACATGGAGGGTGACAGCCACC GTATCCATCGCCTCTGCATGGGCAGCACTTTGGCAAGGGCCAGGCTCTCTGGGGATGTCCTGAATCCCTG GGTACCCAACTGGGAGCTGGGGGAGCCTCCTGGGAATGCCCCAGAAGATCCTTCTTCAGGGCCCCTGGTG GGCCCCGACCCGTGTTCCCCCCTCCAGCCTGGCTCCTTCCTCACTGCCCTCACTCGGCCTCAGGGTGTGC CCCCAGGCTGGCCAGAGCTGGCCTTGTCTTCCCACTCAGGGACGTCCCGGAGCCACAGCACCCGCAGTCC CCACAGCACCCAAAACCCCTTTCCCTCACTGAAGGCTGAGCCGCGGCTCACGTGGTGTTGCCTGAGCCGC AGTGTCCCTCTGCCCGCGGAGCAGAAGGCAAAGGCGGCATCTGTGTACTTGGCGGTGCACTTTCCTGGTA GCAGCCTCCGAGATGAGGGTCCCAATGGCCCTCCTGGGAGCAATGGAGGATGGACCTGGACAAGCCCTGG AGAAGGAGGGCCGGCGCAGATGTCCAAGTTCTCCTACCCAACAGTCCCAGGGGTGATGCCCCAGCACCAG GTGTCTGAGCCAGAATGGAAGAAAGGCCTGCCTTGGAGGGCAAAGATGTCTCGTGGGAACAGCAAGCAGA GAAAACTGAAGATCAACCCTAAAAGGTACAAAGGGAATTTCTTGCAGAGCTGTGTTCAGCTGAGAGCCAG TAGACTTCGCACACCAACCTGGGTGCGAAGAAGAAGCCGCCACCCTCCCGCACTTGAGGGACTGAAGCCA TGCAGGACCCCTGGGCAGACCTCTTCAGAAATAGCAGGTCTGAATCTGCAAGAGGAGCCATCTTGTGCCA CCTCAGAATCACCTCCTTGTTGTGGGAAGGAAGAGAAGAAGGAAGGTGACTGCAGACAAACCTTAGGAAC CCTCTCTCTTGGTACAAGTTCAAGAATTGTCAGGGAAATGGACAAACGAACTGTGAAGGATATTTCTCCA TCTGCTGGTGAGCATGGTGACTGTACTACTCACAGCACTGCTGCCACATCAGGATTATCTCTGCAATCTG ACACCTGCCTGGCAGTGGTTAATGACGTGCCTCTACCCCCTGGCAAAGGTCTTGACCTTGGGTTGCTGGA GACTCAGCTGCTGGCCTCCCAGGATTCAGTCTCAACAGATCCCAAACCATACATCTTCTCAGATGCTCAA AGGCCTTCTTCCTTTGGGTCCAAAGGAACTTTTCCCCACCATGACATTGCTACCTCTGTGGCTGCCGTTT GTATTTCTCTGCCAGTGAGAACAGATCACATAGCCCAGGAAATTCACAGTGCTGAATCACGAGACCACAG CCAGACTGCAGGGAGGACTCTGACATCAAGCTCCCCAGACAGCAAAGTCACAGAAGAGGGCAGAGCACAG ACCCTCTTGCCAGGGAGACCTTCATCTGGACAAAGAATTTCAGATTCGGTTCCACTGGAGTCAACTGAAA AAACTCATCTTGAAATACCAGCTTCAGGACCAAGTTCAGCTAGTTCACACCACAAGGAAGGGAGACACAA GACGTTTTTTCCTTCCAGAGGCCAGTATGGGTGTGGGGAAATGACTGTCCCCTGCCCCTCTTTAGGAAGT GACGGTAGGAAACGTCAGGTATCTGGATTAATCACTCGGAAAGATTCTGTGGTTCCTTCTAAGCCAGAGC AGCCCATAGAAATTCCTGAAGCCCCTTCTAAATCCCTCAAGAAGAGGAGTCTGGAAGGAATGAGAAAGCA AACTCGAGTAGAGTTCAGTGACACCAGCAGCGACGATGAAGACCGATTAGTTATAGAAATATGA
Translation (1677 aa): MEVPEPTCPAPPARDQPAPTPGPPGAPGGQASPHLTLGPVLLPPEQGLAPPTVFLKALPIPLYHTVPPGG LQPRAPLVTGSLDGGNVPFILSPVLQPEGPGPTQVGKPAAPTLTVNIVGTLPVLSPGLGPTLGSPGKVRN AGKYLCPHCGRDCLKPSVLEKHIRSHTGERPFPCATCGIAFKTQSNLYKHRRTQTHLNNSRLSSESEGAG GGLLEEGDKAGEPPRPEGRGESRCQGMHEGASERPLSPGAHVPLLAKNLDVRTEAAPCPGSAFADREAPW DSAPMASPGLPAASTQPWRKLPEQKSPTAGKPCALQRQQATAAEKPWDAKAPEGRLRKCESTDSGYLSRS DSAEQPHAPCSPLHSLSEHSAESEGEGGPGPGPGVAGAEPGAREAGLELEKKRLEERIAQLISHNQAVVD DAQLDNVRPRKTGLSKQGSIDLPTPYTYKDSFHFDIRALEPGRRRAPGPVRSTWTPPDKSRPLFFHSVPT QLSTTVECVPVTRSNSLPFVEGSRTWLEPREPRDPWSRTQKPLSPRPGPARLGCRSGLSSTDVPSGHPRA LVRQAAVEDLPGTPIGDALVPAEDTDAKRTAAREAMAGKGRAGGRKCGQRRLKMFSQEKWQVYGDETFKR IYQKMKASPHGGKKAREVGMGSGAELGFPLQKEAAGSSGTVPTQDRRTPVHEDISAGATPEPWGNPPALE ASLVTEPTKHGETVARRGDSDRPRVEEAVSSPALGGRDSPCSGSRSPLVSPNGRLELGWQMPPAPGPLKG GDVEAPRPVWPDPKLEGGARGVGDVQETCLWAQTVLRWPSRGSGEDKLPSERKKLKVEDLHSWKQPEPVS AETPGGPTQPASLSSQKQDADPGEVPGGSKESARQVGEPLESSGASLAAASVALKRVGPRDKATPLHPAA PAPAEHPSLATPPQAPRVLSALADNAFSPKYLLRLPQAETPLPLPIPWGPRHSQDSLCSSGWPEERASFV GSGLGTPLSPSPASGPSPGEADSILEDPSCSRPQDGRKGAQLGGDKGDRMATSRPAARELPISAPGAPRE ATSSPPTPTCEAHLVQDMEGDSHRIHRLCMGSTLARARLSGDVLNPWVPNWELGEPPGNAPEDPSSGPLV GPDPCSPLQPGSFLTALTRPQGVPPGWPELALSSHSGTSRSHSTRSPHSTQNPFPSLKAEPRLTWCCLSR SVPLPAEQKAKAASVYLAVHFPGSSLRDEGPNGPPGSNGGWTWTSPGEGGPAQMSKFSYPTVPGVMPQHQ VSEPEWKKGLPWRAKMSRGNSKQRKLKINPKRYKGNFLQSCVQLRASRLRTPTWVRRRSRHPPALEGLKP CRTPGQTSSEIAGLNLQEEPSCATSESPPCCGKEEKKEGDCRQTLGTLSLGTSSRIVREMDKRTVKDISP SAGEHGDCTTHSTAATSGLSLQSDTCLAVVNDVPLPPGKGLDLGLLETQLLASQDSVSTDPKPYIFSDAQ RPSSFGSKGTFPHHDIATSVAAVCISLPVRTDHIAQEIHSAESRDHSQTAGRTLTSSSPDSKVTEEGRAQ TLLPGRPSSGQRISDSVPLESTEKTHLEIPASGPSSASSHHKEGRHKTFFPSRGQYGCGEMTVPCPSLGS DGRKRQVSGLITRKDSVVPSKPEQPIEIPEAPSKSLKKRSLEGMRKQTRVEFSDTSSDDEDRLVIEI
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