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Report for CCDS1276.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1276.1 Public Homo sapiens 1 ATP1B1 24 110 108 CCDS HistoryNCBI Gene:481Re-query CCDS DB by CCDS ID:1276.1Re-query CCDS DB by GeneID:481See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1276.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000367815.9 ENSP00000356789.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000367815.9Link to Ensembl Protein Viewer:ENSP00000356789.3Re-query CCDS DB by Nucleotide ID:ENST00000367815Re-query CCDS DB by Protein ID:ENSP00000356789
Original member Current member EBI ENST00000367816.5 ENSP00000356790.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000367816.5Link to Ensembl Protein Viewer:ENSP00000356790.1Re-query CCDS DB by Nucleotide ID:ENST00000367816Re-query CCDS DB by Protein ID:ENSP00000356790
Original member Current member EBI ENST00000689522.1 ENSP00000509039.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000689522.1Link to Ensembl Protein Viewer:ENSP00000509039.1Re-query CCDS DB by Nucleotide ID:ENST00000689522Re-query CCDS DB by Protein ID:ENSP00000509039
Original member Current member EBI ENST00000690184.1 ENSP00000509517.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000690184.1Link to Ensembl Protein Viewer:ENSP00000509517.1Re-query CCDS DB by Nucleotide ID:ENST00000690184Re-query CCDS DB by Protein ID:ENSP00000509517
Original member Current member NCBI NM_001677.4 NP_001668.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001677.4Link to Protein Sequence:NP_001668.1Re-query CCDS DB by Nucleotide ID:NM_001677Re-query CCDS DB by Protein ID:NP_001668Link to BLAST:NP_001668.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001668.1 303 P05026-1 303 100% 0 0

Chromosomal Locations for CCDS 1276.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 169106830 169106926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169111370 169111498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169124884 169125039 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169127224 169127408 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169130010 169130090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 169131292 169131555 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGCCCGCGGGAAAGCCAAGGAGGAGGGCAGCTGGAAGAAATTCATCTGGAACTCAGAGAAGAAGGAGT
TTCTGGGCAGGACCGGTGGCAGTTGGTTTAAGATCCTTCTATTCTACGTAATATTTTATGGCTGCCTGGC
TGGCATCTTCATCGGAACCATCCAAGTGATGCTGCTCACCATCAGTGAATTTAAGCCCACATATCAGGAC
CGAGTGGCCCCGCCAGGATTAACACAGATTCCTCAGATCCAGAAGACTGAAATTTCCTTTCGTCCTAATG
ATCCCAAGAGCTATGAGGCATATGTACTGAACATAGTTAGGTTCCTGGAAAAGTACAAAGATTCAGCCCA
GAGGGATGACATGATTTTTGAAGATTGTGGCGATGTGCCCAGTGAACCGAAAGAACGAGGAGACTTTAAT
CATGAACGAGGAGAGCGAAAGGTCTGCAGATTCAAGCTTGAATGGCTGGGAAATTGCTCTGGATTAAATG
ATGAAACTTATGGCTACAAAGAGGGCAAACCGTGCATTATTATAAAGCTCAACCGAGTTCTAGGCTTCAA
ACCTAAGCCTCCCAAGAATGAGTCCTTGGAGACTTACCCAGTGATGAAGTATAACCCAAATGTCCTTCCC
GTTCAGTGCACTGGCAAGCGAGATGAAGATAAGGATAAAGTTGGAAATGTGGAGTATTTTGGACTGGGCA
ACTCCCCTGGTTTTCCTCTGCAGTATTATCCGTACTATGGCAAACTCCTGCAGCCCAAATACCTGCAGCC
CCTGCTGGCCGTACAGTTCACCAATCTTACCATGGACACTGAAATTCGCATAGAGTGTAAGGCGTACGGT
GAGAACATTGGGTACAGTGAGAAAGACCGTTTTCAGGGACGTTTTGATGTAAAAATTGAAGTTAAGAGCT
GA

Translation (303 aa):
MARGKAKEEGSWKKFIWNSEKKEFLGRTGGSWFKILLFYVIFYGCLAGIFIGTIQVMLLTISEFKPTYQD
RVAPPGLTQIPQIQKTEISFRPNDPKSYEAYVLNIVRFLEKYKDSAQRDDMIFEDCGDVPSEPKERGDFN
HERGERKVCRFKLEWLGNCSGLNDETYGYKEGKPCIIIKLNRVLGFKPKPPKNESLETYPVMKYNPNVLP
VQCTGKRDEDKDKVGNVEYFGLGNSPGFPLQYYPYYGKLLQPKYLQPLLAVQFTNLTMDTEIRIECKAYG
ENIGYSEKDRFQGRFDVKIEVKS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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