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Report for CCDS9567.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9567.1 Public Homo sapiens 14 RNASE8 24 110 108 CCDS HistoryNCBI Gene:122665Re-query CCDS DB by CCDS ID:9567.1Re-query CCDS DB by GeneID:122665See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9567.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308227.2 ENSP00000311398.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308227.2Link to Ensembl Protein Viewer:ENSP00000311398.2Re-query CCDS DB by Nucleotide ID:ENST00000308227Re-query CCDS DB by Protein ID:ENSP00000311398
Original member Current member NCBI NM_138331.2 NP_612204.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_138331.2Link to Protein Sequence:NP_612204.1Re-query CCDS DB by Nucleotide ID:NM_138331Re-query CCDS DB by Protein ID:NP_612204Link to BLAST:NP_612204.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_612204.1 154 Q8TDE3 154 100% 0 0

Chromosomal Locations for CCDS 9567.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21057893 21058357 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGGCACCGGCCAGAGCAGGATGCTGCCCCCTGCTGCTGCTGCTTCTGGGGCTGTGGGTGGCAGAGGTCC
TAGTCAGAGCCAAGCCCAAGGACATGACATCATCTCAGTGGTTTAAAACTCAGCATGTGCAGCCCAGCCC
TCAAGCATGCAACTCAGCCATGAGCATCATCAATAAGTACACAGAACGGTGCAAAGACCTCAACACCTTC
CTGCACGAGCCCTTCTCCAGTGTGGCCATCACCTGCCAGACCCCCAACATAGCCTGCAAGAATAGCTGTA
AAAACTGCCACCAGAGCCACGGGCCCATGTCCCTGACCATGGGTGAGCTCACCTCAGGGAAGTACCCAAA
CTGCAGGTACAAAGAGAAGCACCTGAACACACCTTACATAGTGGCCTGTGACCCTCCACAACAGGGTGAC
CCAGGGTACCCACTTGTTCCTGTGCACTTGGATAAAGTTGTCTAA

Translation (154 aa):
MAPARAGCCPLLLLLLGLWVAEVLVRAKPKDMTSSQWFKTQHVQPSPQACNSAMSIINKYTERCKDLNTF
LHEPFSSVAITCQTPNIACKNSCKNCHQSHGPMSLTMGELTSGKYPNCRYKEKHLNTPYIVACDPPQQGD
PGYPLVPVHLDKVV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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