NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS6181.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
6181.1 Public Homo sapiens 8 ARMC1 24 110 108 CCDS HistoryNCBI Gene:55156Re-query CCDS DB by CCDS ID:6181.1Re-query CCDS DB by GeneID:55156See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 6181.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000276569.8 ENSP00000276569.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000276569.8Link to Ensembl Protein Viewer:ENSP00000276569.3Re-query CCDS DB by Nucleotide ID:ENST00000276569Re-query CCDS DB by Protein ID:ENSP00000276569
Original member Current member NCBI NM_018120.6 NP_060590.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_018120.6Link to Protein Sequence:NP_060590.1Re-query CCDS DB by Nucleotide ID:NM_018120Re-query CCDS DB by Protein ID:NP_060590Link to BLAST:NP_060590.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_060590.1 282 Q9NVT9-1 282 100% 0 0

Chromosomal Locations for CCDS 6181.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 65604394 65604585 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65605263 65605337 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65605422 65605538 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65613244 65613433 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65622263 65622354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 65627216 65627398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (849 nt):
ATGAATTCTTCCACTTCCACCATGAGTGAAGAGCCTGACGCTCTATCGGTAGTTAACCAGTTACGGGATC
TAGCAGCAGATCCGTTAAACAGAAGAGCCATCGTCCAGGATCAGGGATGTCTGCCTGGCCTTATTTTATT
TATGGACCATCCCAACCCTCCAGTCGTCCACTCCGCTTTGCTTGCTCTTCGATACTTGGCAGAATGCCGT
GCAAACAGAGAAAAGATGAAAGGAGAACTGGGTATGATGTTGAGCTTACAAAATGTTATACAGAAAACTA
CAACTCCAGGAGAAACAAAACTTCTGGCCTCTGAAATCTATGACATTCTTCAGTCCTCCAATATGGCAGA
TGGTGATAGTTTTAATGAGATGAATTCACGTCGAAGGAAAGCTCAATTTTTTCTGGGAACTACAAACAAA
CGTGCCAAAACAGTGGTTTTGCATATAGATGGCCTTGATGATACGTCTCGGAGAAATCTATGTGAAGAGG
CTTTGTTAAAAATTAAAGGTGTTATTAGCTTTACTTTTCAAATGGCTGTTCAAAGGTGTGTGGTGCGAAT
CCGTTCAGATTTGAAAGCTGAGGCTTTGGCATCAGCAATAGCATCAACCAAGGTTATGAAAGCTCAGCAA
GTTGTGAAAAGTGAAAGTGGAGAAGAGATGTTGGTCCCATTCCAAGATACTCCTGTGGAAGTTGAACAGA
ACACAGAGCTACCTGACTACCTGCCTGAGGATGAGAGTCCCACAAAGGAACAGGACAAAGCGGTGTCCCG
GGTCGGCTCACACCCAGAAGGTGGAGCTAGCTGGCTTAGCACAGCTGCAAACTTTTTATCCAGATCATTT
TATTGGTGA

Translation (282 aa):
MNSSTSTMSEEPDALSVVNQLRDLAADPLNRRAIVQDQGCLPGLILFMDHPNPPVVHSALLALRYLAECR
ANREKMKGELGMMLSLQNVIQKTTTPGETKLLASEIYDILQSSNMADGDSFNEMNSRRRKAQFFLGTTNK
RAKTVVLHIDGLDDTSRRNLCEEALLKIKGVISFTFQMAVQRCVVRIRSDLKAEALASAIASTKVMKAQQ
VVKSESGEEMLVPFQDTPVEVEQNTELPDYLPEDESPTKEQDKAVSRVGSHPEGGASWLSTAANFLSRSF
YW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH