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Report for CCDS35171.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
35171.1 Public Homo sapiens 9 FAM163B 24 110 108 CCDS HistoryNCBI Gene:642968Re-query CCDS DB by CCDS ID:35171.1Re-query CCDS DB by GeneID:642968See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 35171.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000496132.2 ENSP00000419867.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000496132.2Link to Ensembl Protein Viewer:ENSP00000419867.1Re-query CCDS DB by Nucleotide ID:ENST00000496132Re-query CCDS DB by Protein ID:ENSP00000419867
Original member Current member EBI ENST00000673969.1 ENSP00000501259.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000673969.1Link to Ensembl Protein Viewer:ENSP00000501259.1Re-query CCDS DB by Nucleotide ID:ENST00000673969Re-query CCDS DB by Protein ID:ENSP00000501259
Original member Current member NCBI NM_001080515.3 NP_001073984.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001080515.3Link to Protein Sequence:NP_001073984.1Re-query CCDS DB by Nucleotide ID:NM_001080515Re-query CCDS DB by Protein ID:NP_001073984Link to BLAST:NP_001073984.1
Original member Current member NCBI NM_001371529.1 NP_001358458.1 Accepted alive Link to Nucleotide Sequence:NM_001371529.1Link to Protein Sequence:NP_001358458.1Re-query CCDS DB by Nucleotide ID:NM_001371529Re-query CCDS DB by Protein ID:NP_001358458Link to BLAST:NP_001358458.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001073984.1 166 P0C2L3 166 100% 0 0
NP_001358458.1 166 P0C2L3 166 100% 0 0

Chromosomal Locations for CCDS 35171.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 133579022 133579429 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 133580131 133580223 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (501 nt):
ATGACAGCCGGGACCGTGGTCATCACCGGGGGCATCTTGGCGACTGTGATTTTGCTCTGCATCATCGCTG
TTCTGTGCTACTGCCGGCTCCAGTACTACTGCTGCAAGAAGGACGAGTCGGAGGAGGACGAGGAGGAACC
AGACTTCGCCGTTCACTCGCACCTGCCCCCGCTGCACTCCAACCGCAACCTGGTGCTGACCAACGGGCCG
GCGCTCTACCCCACCGCCTCCACCTCCTTCAGCCAGAAGTCCCCGCAGGCCCGCGCCCTCTGCCGCAGCT
GCTCCCACTGCGAGCCCCCCACCTTCTTCCTGCAGGAGCCGCCGGAGGAGGAAGAGGACGTGCTGAACGG
CGGGGAGCGCGTGCTCTACAAGAGCGTGAGCCAGGAGGACGTGGAGCTGCCCCCGGGGGGCTTCGGGGGC
CTGCAGGCGCTCAACCCCAACCGCCTCTCAGCCATGCGGGAGGCCTTCGCCAGGAGCCGCAGCATCAGCA
CCGACGTGTGA

Translation (166 aa):
MTAGTVVITGGILATVILLCIIAVLCYCRLQYYCCKKDESEEDEEEPDFAVHSHLPPLHSNRNLVLTNGP
ALYPTASTSFSQKSPQARALCRSCSHCEPPTFFLQEPPEEEEDVLNGGERVLYKSVSQEDVELPPGGFGG
LQALNPNRLSAMREAFARSRSISTDV


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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