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Report for CCDS34883.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
34883.1 Public Homo sapiens 8 DDHD2 24 110 108 CCDS HistoryNCBI Gene:23259Re-query CCDS DB by CCDS ID:34883.1Re-query CCDS DB by GeneID:23259See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 34883.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000397166.7 ENSP00000380352.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000397166.7Link to Ensembl Protein Viewer:ENSP00000380352.2Re-query CCDS DB by Nucleotide ID:ENST00000397166Re-query CCDS DB by Protein ID:ENSP00000380352
Original member Current member EBI ENST00000520272.6 ENSP00000429932.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000520272.6Link to Ensembl Protein Viewer:ENSP00000429932.2Re-query CCDS DB by Nucleotide ID:ENST00000520272Re-query CCDS DB by Protein ID:ENSP00000429932
Original member Current member NCBI NM_001164232.2 NP_001157704.1 Accepted alive Link to Nucleotide Sequence:NM_001164232.2Link to Protein Sequence:NP_001157704.1Re-query CCDS DB by Nucleotide ID:NM_001164232Re-query CCDS DB by Protein ID:NP_001157704Link to BLAST:NP_001157704.1
Original member Current member NCBI NM_001362911.2 NP_001349840.1 Accepted alive Link to Nucleotide Sequence:NM_001362911.2Link to Protein Sequence:NP_001349840.1Re-query CCDS DB by Nucleotide ID:NM_001362911Re-query CCDS DB by Protein ID:NP_001349840Link to BLAST:NP_001349840.1
Original member Current member NCBI NM_001362912.2 NP_001349841.1 Accepted alive Link to Nucleotide Sequence:NM_001362912.2Link to Protein Sequence:NP_001349841.1Re-query CCDS DB by Nucleotide ID:NM_001362912Re-query CCDS DB by Protein ID:NP_001349841Link to BLAST:NP_001349841.1
Original member Current member NCBI NM_001362914.2 NP_001349843.1 Accepted alive Link to Nucleotide Sequence:NM_001362914.2Link to Protein Sequence:NP_001349843.1Re-query CCDS DB by Nucleotide ID:NM_001362914Re-query CCDS DB by Protein ID:NP_001349843Link to BLAST:NP_001349843.1
Original member Current member NCBI NM_015214.3 NP_056029.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015214.3Link to Protein Sequence:NP_056029.2Re-query CCDS DB by Nucleotide ID:NM_015214Re-query CCDS DB by Protein ID:NP_056029Link to BLAST:NP_056029.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001157704.1 711 O94830-1 711 100% 0 0
NP_001349840.1 711 O94830-1 711 100% 0 0
NP_001349841.1 711 O94830-1 711 100% 0 0
NP_001349843.1 711 O94830-1 711 100% 0 0
NP_056029.2 711 O94830-1 711 100% 0 0

Chromosomal Locations for CCDS 34883.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 38232995 38233214 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38234394 38234584 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38237538 38237627 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38238089 38238209 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38240275 38240364 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38242250 38242385 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38245742 38245950 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38246233 38246300 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38247713 38247835 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38249708 38249803 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38251912 38252028 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38252132 38252287 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38252722 38252824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38252957 38253127 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38253556 38253718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 38260040 38260121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2136 nt):
ATGTCATCAGTGCAGTCACAACAGGAGCAGTTGTCCCAGTCAGATCCATCTCCGTCACCAAACTCATGTA
GTTCCTTTGAGCTAATAGACATGGATGCTGGCAGCTTGTATGAACCAGTTTCTCCCCATTGGTTTTATTG
TAAGATAATAGATTCTAAGGAGACATGGATTCCTTTCAACTCTGAGGATTCACAGCAGCTGGAAGAGGCA
TATAGCTCTGGAAAAGGTTGTAATGGGAGAGTTGTTCCTACTGATGGGGGCAGATATGATGTTCATTTGG
GGGAGAGGATGCGGTATGCTGTATACTGGGATGAACTGGCATCGGAAGTGAGACGATGTACGTGGTTTTA
CAAGGGGGACAAAGACAATAAGTATGTTCCCTACTCGGAGAGCTTCAGCCAAGTTTTAGAGGAAACTTAC
ATGCTTGCTGTAACTTTGGATGAATGGAAAAAGAAACTGGAATCTCCCAACAGAGAAATTATTATTTTAC
ACAATCCAAAGCTTATGGTGCATTACCAGCCAGTTGCAGGGTCTGATGATTGGGGTTCAACACCCACGGA
GCAGGGTCGACCAAGAACTGTGAAGAGAGGAGTTGAGAACATCTCTGTTGACATTCATTGTGGAGAACCT
TTACAAATAGATCACTTGGTTTTTGTAGTCCATGGGATTGGACCAGCTTGTGATCTCCGCTTTCGAAGCA
TTGTACAGTGTGTTAATGATTTTCGCAGTGTTTCCTTGAACTTGCTACAGACACATTTTAAGAAAGCCCA
AGAAAATCAGCAGATTGGGAGGGTAGAATTTCTTCCAGTCAACTGGCACAGTCCTTTGCATTCTACTGGT
GTGGATGTAGATCTGCAGCGAATAACCCTGCCCAGCATTAACCGCCTCAGGCACTTCACCAATGACACAA
TTCTGGATGTCTTCTTCTACAATAGTCCCACCTACTGTCAGACTATTGTGGACACAGTTGCTTCTGAAAT
GAACCGAATATACACACTTTTTCTACAGAGGAACCCTGATTTCAAAGGGGGTGTATCCATTGCTGGTCAT
AGTTTAGGTTCGCTTATATTGTTTGATATCCTAACAAATCAGAAAGATTCTTTGGGGGATATTGACAGTG
AAAAGGATTCGCTAAATATTGTAATGGATCAAGGAGATACACCTACACTAGAGGAAGATTTGAAGAAACT
TCAGCTCTCTGAATTCTTTGATATCTTTGAGAAGGAGAAAGTAGATAAGGAAGCTCTGGCTTTATGTACA
GACCGAGATCTTCAGGAAATAGGAATTCCTTTAGGACCAAGAAAGAAGATATTAAACTATTTCAGCACCA
GAAAAAACTCAATGGGTATTAAGAGACCAGCCCCGCAGCCTGCTTCAGGGGCAAACATCCCCAAAGAATC
TGAGTTCTGCAGTAGCAGTAATACTAGAAATGGTGACTATCTGGATGTTGGCATTGGGCAGGTGTCTGTG
AAATACCCCCGGCTCATCTATAAACCAGAGATATTCTTTGCCTTTGGATCTCCCATTGGAATGTTCCTTA
CTGTCCGAGGACTAAAAAGAATTGATCCCAACTACAGATTTCCAACGTGCAAAGGTTTCTTCAATATTTA
TCACCCTTTTGATCCTGTGGCCTATAGGATTGAACCAATGGTGGTCCCAGGAGTGGAATTTGAGCCAATG
CTGATCCCACATCATAAAGGCAGGAAGCGGATGCACTTAGAACTGAGAGAGGGCTTGACCAGGATGAGTA
TGGACCTTAAGAACAACTTGCTAGGTTCGCTGCGGATGGCCTGGAAGTCTTTTACCAGAGCTCCATACCC
TGCCTTACAAGCTTCAGAAACACCAGAAGAAACTGAAGCAGAACCTGAATCAACTTCAGAGAAGCCTAGT
GATGTTAACACAGAAGAGACCTCTGTGGCAGTTAAAGAAGAAGTCCTGCCTATCAATGTGGGGATGCTGA
ATGGAGGCCAACGCATTGACTATGTGCTACAGGAGAAGCCTATTGAAAGTTTTAATGAGTATTTATTTGC
TTTACAAAGCCATCTATGCTACTGGGAGTCTGAAGATACAGTATTGCTCGTCCTCAAAGAGATCTACCAA
ACCCAGGGTATCTTCCTTGATCAGCCTTTACAGTAA

Translation (711 aa):
MSSVQSQQEQLSQSDPSPSPNSCSSFELIDMDAGSLYEPVSPHWFYCKIIDSKETWIPFNSEDSQQLEEA
YSSGKGCNGRVVPTDGGRYDVHLGERMRYAVYWDELASEVRRCTWFYKGDKDNKYVPYSESFSQVLEETY
MLAVTLDEWKKKLESPNREIIILHNPKLMVHYQPVAGSDDWGSTPTEQGRPRTVKRGVENISVDIHCGEP
LQIDHLVFVVHGIGPACDLRFRSIVQCVNDFRSVSLNLLQTHFKKAQENQQIGRVEFLPVNWHSPLHSTG
VDVDLQRITLPSINRLRHFTNDTILDVFFYNSPTYCQTIVDTVASEMNRIYTLFLQRNPDFKGGVSIAGH
SLGSLILFDILTNQKDSLGDIDSEKDSLNIVMDQGDTPTLEEDLKKLQLSEFFDIFEKEKVDKEALALCT
DRDLQEIGIPLGPRKKILNYFSTRKNSMGIKRPAPQPASGANIPKESEFCSSSNTRNGDYLDVGIGQVSV
KYPRLIYKPEIFFAFGSPIGMFLTVRGLKRIDPNYRFPTCKGFFNIYHPFDPVAYRIEPMVVPGVEFEPM
LIPHHKGRKRMHLELREGLTRMSMDLKNNLLGSLRMAWKSFTRAPYPALQASETPEETEAEPESTSEKPS
DVNTEETSVAVKEEVLPINVGMLNGGQRIDYVLQEKPIESFNEYLFALQSHLCYWESEDTVLLVLKEIYQ
TQGIFLDQPLQ


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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