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Report for CCDS47824.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
47824.1 Public Homo sapiens 8 SORBS3 24 110 108 CCDS HistoryNCBI Gene:10174Re-query CCDS DB by CCDS ID:47824.1Re-query CCDS DB by GeneID:10174See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 47824.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000523965.5 ENSP00000429764.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000523965.5Link to Ensembl Protein Viewer:ENSP00000429764.2Re-query CCDS DB by Nucleotide ID:ENST00000523965Re-query CCDS DB by Protein ID:ENSP00000429764
Original member Current member NCBI NM_001018003.3 NP_001018003.1 Accepted alive Link to Nucleotide Sequence:NM_001018003.3Link to Protein Sequence:NP_001018003.1Re-query CCDS DB by Nucleotide ID:NM_001018003Re-query CCDS DB by Protein ID:NP_001018003Link to BLAST:NP_001018003.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001018003.1 329 O60504-2 329 100% 0 0

Chromosomal Locations for CCDS 47824.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 22566421 22566484 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22566661 22566713 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22566822 22566868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22567061 22567175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22569148 22569273 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22570910 22571221 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22571718 22571821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22572340 22572446 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 22574667 22574728 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (990 nt):
ATGGCTGATGGAGGAAGCCCCTTCCTAGGTCGGAGGGACTTTGTCTACCCTTCCTCAACCCGAGACCCTA
GTGCCTCTAACGGAGGGGGCAGCCCAGCCAGGAGGGAAGAGAAGAAGAGAAAGGCCGCCAGGCTCAAGTT
TGACTTCCAGGCGCAGTCCCCCAAGGAGCTGACTCTGCAGAAGGGTGACATTGTCTACATCCACAAGGAG
GTGGACAAGAACTGGCTGGAGGGAGAGCACCACGGCCGCCTGGGCATCTTCCCTGCTAATTATGTGGAGG
TGCTGCCCGCAGATGAGATCCCTAAGCCCATCAAGCCCCCGACCTACCAGGTGCTGGAGTATGGAGAGGC
TGTGGCCCAGTACACCTTCAAGGGGGACCTGGAGGTGGAGCTGTCCTTCCGCAAGGGAGAGCACATCTGC
CTGATCCGCAAGGTGAACGAGAACTGGTACGAGGGACGCATCACGGGCACGGGGCGCCAAGGCATATTCC
CTGCCAGCTACGTGCAGGTGTCTCGTGAACCCCGGCTCCGGCTCTGTGACGACGGCCCCCAGCTCCCCAC
GTCTCCCCGCCTGACCGCTGCCGCCCGCTCAGCCCGTCACCCCAGCTCCCCCTCAGCCCTGCGCAGCCCA
GCTGACCCCATCGACTTGGGGGGACAGACCTCCCCCCGTCGCACTGGCTTCTCCTTCCCCACCCAGGAGC
CTAGACCCCAGACCCAGAATCTTGGCACCCCTGGTCCAGCTCTGTCCCACTCTCGAGGTCCCAGCCATCC
CCTGGACCTGGGGACCTCCTCTCCTAACACCTCTCAGATACACTGGACCCCGTACCGGGCGATGTACCAG
TACAGGCCCCAGAACGAAGACGAGCTGGAGCTGCGCGAGGGGGACAGGGTGGATGTCATGCAGCAGTGTG
ACGATGGCTGGTTTGTGGGTGTCTCCCGGAGGACCCAGAAATTCGGAACGTTCCCTGGAAATTACGTTGC
CCCGGTGTGA

Translation (329 aa):
MADGGSPFLGRRDFVYPSSTRDPSASNGGGSPARREEKKRKAARLKFDFQAQSPKELTLQKGDIVYIHKE
VDKNWLEGEHHGRLGIFPANYVEVLPADEIPKPIKPPTYQVLEYGEAVAQYTFKGDLEVELSFRKGEHIC
LIRKVNENWYEGRITGTGRQGIFPASYVQVSREPRLRLCDDGPQLPTSPRLTAAARSARHPSSPSALRSP
ADPIDLGGQTSPRRTGFSFPTQEPRPQTQNLGTPGPALSHSRGPSHPLDLGTSSPNTSQIHWTPYRAMYQ
YRPQNEDELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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