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Report for CCDS75742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
75742.1 Public Homo sapiens 8 TMEM68 24 110 108 CCDS HistoryNCBI Gene:137695Re-query CCDS DB by CCDS ID:75742.1Re-query CCDS DB by GeneID:137695See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 75742.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000434581.7 ENSP00000395204.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000434581.7Link to Ensembl Protein Viewer:ENSP00000395204.2Re-query CCDS DB by Nucleotide ID:ENST00000434581Re-query CCDS DB by Protein ID:ENSP00000395204
Original member Current member EBI ENST00000617782.4 ENSP00000478242.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000617782.4Link to Ensembl Protein Viewer:ENSP00000478242.1Re-query CCDS DB by Nucleotide ID:ENST00000617782Re-query CCDS DB by Protein ID:ENSP00000478242
Original member Current member NCBI NM_001286657.2 NP_001273586.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001286657.2Link to Protein Sequence:NP_001273586.1Re-query CCDS DB by Nucleotide ID:NM_001286657Re-query CCDS DB by Protein ID:NP_001273586Link to BLAST:NP_001273586.1
Original member Current member NCBI NM_001363176.1 NP_001350105.1 Accepted alive Link to Nucleotide Sequence:NM_001363176.1Link to Protein Sequence:NP_001350105.1Re-query CCDS DB by Nucleotide ID:NM_001363176Re-query CCDS DB by Protein ID:NP_001350105Link to BLAST:NP_001350105.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001273586.1 324 Q96MH6-1 324 100% 0 0
NP_001350105.1 324 Q96MH6-1 324 100% 0 0

Chromosomal Locations for CCDS 75742.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 8 (NC_000008.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 55740132 55740218 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55743481 55743620 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55745061 55745121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55750964 55751157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55756244 55756411 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 55762635 55762959 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (975 nt):
ATGATAGACAAAAATCAAACCTGTGGTGTAGGACAGGATTCTGTGCCCTATATGATTTGTCTGATTCACA
TACTCGAAGAATGGTTTGGTGTGGAGCAGTTGGAGGACTATTTGAATTTTGCAAACTATCTCTTGTGGGT
TTTTACACCACTAATACTTTTAATACTTCCTTACTTTACTATCTTTCTTCTCTACCTTACTATTATTTTC
TTACACATTTATAAGAGAAAGAATGTATTGAAAGAAGCCTACTCTCATAATTTATGGGATGGTGCAAGGA
AAACAGTGGCAACTCTGTGGGATGGACATGCAGCCGTTTGGCATGGTTATGAAGTTCATGGAATGGAAAA
AATACCAGAAGATGGACCAGCACTTATAATTTTTTATCATGGAGCTATTCCTATAGATTTTTACTATTTC
ATGGCTAAAATATTTATACACAAAGGCAGAACTTGCCGAGTAGTAGCTGATCACTTTGTCTTTAAAATTC
CAGGGTTTAGTTTATTACTGGATGTGTTTTGTGCTCTACATGGACCAAGAGAAAAATGTGTTGAAATTCT
GAGGAGTGGCCACTTGTTAGCTATCTCACCAGGTGGAGTTCGAGAAGCCCTAATTAGTGATGAAACTTAT
AACATCGTATGGGGTCATCGCAGAGGCTTTGCTCAGGTTGCAATTGATGCAAAAGTGCCCATTATTCCTA
TGTTTACACAAAATATTCGAGAAGGATTTAGATCACTTGGAGGAACAAGGTTATTTAGGTGGCTTTATGA
AAAATTCCGCTATCCATTTGCTCCAATGTATGGAGGTTTTCCAGTGAAGTTACGGACCTATTTAGGCGAC
CCCATTCCGTATGACCCACAGATAACAGCGGAAGAATTAGCTGAAAAGACGAAGAATGCTGTTCAAGCTT
TGATTGATAAGCACCAAAGAATACCAGGAAACATTATGAGTGCTTTGTTAGAACGTTTTCATTGA

Translation (324 aa):
MIDKNQTCGVGQDSVPYMICLIHILEEWFGVEQLEDYLNFANYLLWVFTPLILLILPYFTIFLLYLTIIF
LHIYKRKNVLKEAYSHNLWDGARKTVATLWDGHAAVWHGYEVHGMEKIPEDGPALIIFYHGAIPIDFYYF
MAKIFIHKGRTCRVVADHFVFKIPGFSLLLDVFCALHGPREKCVEILRSGHLLAISPGGVREALISDETY
NIVWGHRRGFAQVAIDAKVPIIPMFTQNIREGFRSLGGTRLFRWLYEKFRYPFAPMYGGFPVKLRTYLGD
PIPYDPQITAEELAEKTKNAVQALIDKHQRIPGNIMSALLERFH


Links Key
 Links to:   History report
  BLAST report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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