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Report for CCDS45678.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
45678.1 Public Homo sapiens 17 DNAJC7 24 110 108 CCDS HistoryNCBI Gene:7266Re-query CCDS DB by CCDS ID:45678.1Re-query CCDS DB by GeneID:7266See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 6, NCBI annotation release 37.1, Ensembl annotation release 55

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 45678.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000316603.12 ENSP00000313311.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000316603.12Link to Ensembl Protein Viewer:ENSP00000313311.7Re-query CCDS DB by Nucleotide ID:ENST00000316603Re-query CCDS DB by Protein ID:ENSP00000313311
Original member Current member EBI ENST00000426588.7 ENSP00000394327.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000426588.7Link to Ensembl Protein Viewer:ENSP00000394327.2Re-query CCDS DB by Nucleotide ID:ENST00000426588Re-query CCDS DB by Protein ID:ENSP00000394327
Original member Current member EBI ENST00000590774.6 ENSP00000465340.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000590774.6Link to Ensembl Protein Viewer:ENSP00000465340.2Re-query CCDS DB by Nucleotide ID:ENST00000590774Re-query CCDS DB by Protein ID:ENSP00000465340
Original member Current member EBI ENST00000674166.1 ENSP00000501364.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674166.1Link to Ensembl Protein Viewer:ENSP00000501364.1Re-query CCDS DB by Nucleotide ID:ENST00000674166Re-query CCDS DB by Protein ID:ENSP00000501364
Original member Current member EBI ENST00000674252.1 ENSP00000501366.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674252.1Link to Ensembl Protein Viewer:ENSP00000501366.1Re-query CCDS DB by Nucleotide ID:ENST00000674252Re-query CCDS DB by Protein ID:ENSP00000501366
Original member Current member EBI ENST00000674303.1 ENSP00000501468.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674303.1Link to Ensembl Protein Viewer:ENSP00000501468.1Re-query CCDS DB by Nucleotide ID:ENST00000674303Re-query CCDS DB by Protein ID:ENSP00000501468
Original member Current member EBI ENST00000674287.1 ENSP00000501482.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000674287.1Link to Ensembl Protein Viewer:ENSP00000501482.1Re-query CCDS DB by Nucleotide ID:ENST00000674287Re-query CCDS DB by Protein ID:ENSP00000501482
Original member Current member NCBI NM_001144766.3 NP_001138238.1 Accepted alive Link to Nucleotide Sequence:NM_001144766.3Link to Protein Sequence:NP_001138238.1Re-query CCDS DB by Nucleotide ID:NM_001144766Re-query CCDS DB by Protein ID:NP_001138238Link to BLAST:NP_001138238.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001138238.1 438 Q99615-2 438 100% 0 0

Chromosomal Locations for CCDS 45678.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 41976733 41976770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41977261 41977323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41981855 41982007 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41982255 41982401 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41983563 41983636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41987819 41987910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41988732 41988896 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41989404 41989557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41990264 41990382 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41994870 41994944 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41996311 41996424 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 41997115 41997237 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1317 nt):
ATGTGTCCTAAAAATGCTAGCTATTATGGTAATCGAGCAGCCACCTTGATGATGCTTGGAAGGTTCCGGG
AAGCTCTTGGAGATGCACAACAGTCAGTGAGGTTGGATGACAGTTTTGTCCGGGGACATCTACGAGAGGG
CAAGTGCCACCTCTCTCTGGGGAATGCCATGGCAGCATGTCGCAGCTTCCAGAGAGCCCTAGAACTGGAT
CATAAAAATGCTCAGGCACAACAAGAGTTCAAGAATGCTAATGCAGTCATGGAATATGAGAAAATAGCAG
AAACAGATTTTGAGAAGCGAGATTTTCGGAAGGTTGTTTTCTGCATGGACCGTGCCCTAGAATTTGCCCC
TGCCTGCCATCGCTTCAAAATCCTCAAGGCAGAATGTTTAGCAATGCTGGGTCGTTATCCAGAAGCACAG
TCTGTGGCTAGTGACATTCTACGAATGGATTCCACCAATGCAGATGCTCTGTATGTACGAGGTCTTTGCC
TTTATTACGAAGATTGTATTGAGAAGGCAGTTCAGTTTTTCGTACAGGCTCTCAGGATGGCTCCTGACCA
CGAGAAGGCCTGCATTGCCTGCAGAAATGCCAAAGCACTCAAAGCAAAGAAAGAAGATGGGAATAAAGCA
TTTAAGGAAGGAAATTACAAACTAGCATATGAACTGTACACAGAAGCCCTGGGGATAGACCCCAACAATA
TAAAAACAAATGCTAAACTCTACTGTAATCGGGGTACGGTTAATTCCAAGCTTAGGAAACTAGATGATGC
AATAGAAGACTGCACAAATGCAGTGAAGCTTGATGACACTTACATAAAAGCCTACTTGAGAAGAGCTCAG
TGTTACATGGACACAGAACAGTATGAAGAAGCAGTACGAGACTATGAAAAAGTATACCAGACAGAGAAAA
CAAAAGAACACAAACAGCTCCTAAAAAATGCGCAGCTGGAACTGAAGAAGAGTAAGAGGAAAGATTACTA
CAAGATTCTAGGAGTGGACAAGAATGCCTCTGAGGACGAGATCAAGAAAGCTTATCGGAAACGGGCCTTG
ATGCACCATCCAGATCGGCATAGTGGAGCCAGTGCTGAGGTTCAGAAGGAGGAGGAGAAGAAGTTCAAGG
AAGTTGGAGAGGCCTTTACTATCCTCTCTGATCCCAAGAAAAAGACTCGCTATGACAGTGGACAGGACCT
AGATGAGGAGGGCATGAATATGGGTGATTTTGATCCAAACAATATCTTCAAGGCATTCTTTGGCGGTCCT
GGCGGCTTCAGCTTTGAAGCATCTGGTCCAGGGAATTTCTTTTTTCAATTTGGCTAA

Translation (438 aa):
MCPKNASYYGNRAATLMMLGRFREALGDAQQSVRLDDSFVRGHLREGKCHLSLGNAMAACRSFQRALELD
HKNAQAQQEFKNANAVMEYEKIAETDFEKRDFRKVVFCMDRALEFAPACHRFKILKAECLAMLGRYPEAQ
SVASDILRMDSTNADALYVRGLCLYYEDCIEKAVQFFVQALRMAPDHEKACIACRNAKALKAKKEDGNKA
FKEGNYKLAYELYTEALGIDPNNIKTNAKLYCNRGTVNSKLRKLDDAIEDCTNAVKLDDTYIKAYLRRAQ
CYMDTEQYEEAVRDYEKVYQTEKTKEHKQLLKNAQLELKKSKRKDYYKILGVDKNASEDEIKKAYRKRAL
MHHPDRHSGASAEVQKEEEKKFKEVGEAFTILSDPKKKTRYDSGQDLDEEGMNMGDFDPNNIFKAFFGGP
GGFSFEASGPGNFFFQFG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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