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Report for CCDS11510.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
11510.1 Public Homo sapiens 17 MYL4 24 110 108 CCDS HistoryNCBI Gene:4635Re-query CCDS DB by CCDS ID:11510.1Re-query CCDS DB by GeneID:4635See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 11510.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354968.5 ENSP00000347055.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000354968.5Link to Ensembl Protein Viewer:ENSP00000347055.1Re-query CCDS DB by Nucleotide ID:ENST00000354968Re-query CCDS DB by Protein ID:ENSP00000347055
Original member Current member EBI ENST00000393450.5 ENSP00000377096.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000393450.5Link to Ensembl Protein Viewer:ENSP00000377096.1Re-query CCDS DB by Nucleotide ID:ENST00000393450Re-query CCDS DB by Protein ID:ENSP00000377096
Original member Current member EBI ENST00000572316.5 ENSP00000461570.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000572316.5Link to Ensembl Protein Viewer:ENSP00000461570.1Re-query CCDS DB by Nucleotide ID:ENST00000572316Re-query CCDS DB by Protein ID:ENSP00000461570
Original member Current member NCBI NM_001002841.2 NP_001002841.1 Accepted alive Link to Nucleotide Sequence:NM_001002841.2Link to Protein Sequence:NP_001002841.1Re-query CCDS DB by Nucleotide ID:NM_001002841Re-query CCDS DB by Protein ID:NP_001002841Link to BLAST:NP_001002841.1
Original member Current member NCBI NM_002476.2 NP_002467.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_002476.2Link to Protein Sequence:NP_002467.1Re-query CCDS DB by Nucleotide ID:NM_002476Re-query CCDS DB by Protein ID:NP_002467Link to BLAST:NP_002467.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001002841.1 197 P12829 197 100% 0 0
NP_002467.1 197 P12829 197 100% 0 0

Chromosomal Locations for CCDS 11510.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 47209423 47209557 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47213799 47213826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47219904 47220053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47221682 47221855 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47222380 47222457 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 47223014 47223042 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (594 nt):
ATGGCTCCCAAGAAGCCTGAGCCTAAGAAGGAGGCAGCCAAGCCAGCTCCAGCTCCAGCTCCAGCCCCTG
CACCAGCCCCTGCCCCAGCTCCTGAGGCTCCCAAGGAACCTGCCTTTGACCCCAAGAGTGTAAAGATAGA
CTTCACTGCCGACCAGATTGAAGAGTTCAAAGAGGCCTTTTCATTGTTTGACCGGACCCCGACTGGAGAG
ATGAAGATCACCTACGGCCAGTGCGGGGATGTACTGCGGGCCCTGGGCCAGAACCCTACCAATGCCGAGG
TGCTGCGTGTGCTGGGCAAGCCCAAGCCTGAAGAGATGAATGTCAAGATGCTGGACTTTGAGACGTTCTT
GCCCATCCTGCAGCACATTTCCCGCAACAAGGAGCAGGGCACCTATGAGGACTTCGTGGAGGGCCTGCGT
GTCTTTGACAAGGAGAGCAATGGCACGGTCATGGGTGCTGAGCTTCGGCACGTCCTTGCCACCCTGGGAG
AGAAGATGACTGAGGCTGAAGTGGAGCAGCTGTTAGCTGGGCAAGAGGATGCCAATGGCTGCATCAATTA
TGAAGCCTTTGTCAAGCACATCATGTCAGGGTGA

Translation (197 aa):
MAPKKPEPKKEAAKPAPAPAPAPAPAPAPAPEAPKEPAFDPKSVKIDFTADQIEEFKEAFSLFDRTPTGE
MKITYGQCGDVLRALGQNPTNAEVLRVLGKPKPEEMNVKMLDFETFLPILQHISRNKEQGTYEDFVEGLR
VFDKESNGTVMGAELRHVLATLGEKMTEAEVEQLLAGQEDANGCINYEAFVKHIMSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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