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Report for CCDS9556.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9556.1 Public Homo sapiens 14 EDDM3A 24 110 108 CCDS HistoryNCBI Gene:10876Re-query CCDS DB by CCDS ID:9556.1Re-query CCDS DB by GeneID:10876See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9556.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326842.3 ENSP00000315098.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000326842.3Link to Ensembl Protein Viewer:ENSP00000315098.2Re-query CCDS DB by Nucleotide ID:ENST00000326842Re-query CCDS DB by Protein ID:ENSP00000315098
Original member Current member NCBI NM_006683.5 NP_006674.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_006683.5Link to Protein Sequence:NP_006674.2Re-query CCDS DB by Nucleotide ID:NM_006683Re-query CCDS DB by Protein ID:NP_006674Link to BLAST:NP_006674.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_006674.2 147 Q14507 147 100% 0 0

Chromosomal Locations for CCDS 9556.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 14 (NC_000014.9)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 20747581 20748024 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (444 nt):
ATGACATCCTCTCTAAAGATTTGGGGCATACTCTTGGCCCTGCTTTGCATCCTTTGCAGGCTGTGTGTAT
ACAGTAACAACATTTACTGGAGAGAATTCATAAAACTTCATTACTTAAGTCCAAGTCGAGAATTCAAAGA
GTACAAATGTGATGTCCTCATGAGAGAAAAAGAGGCTCTGAAAGGCAAGAGCTTTCATATGTTCATCTAT
AGCTTATGGTTCAAAATTCAGCGTGCATGCATCAATGAGAAGGGGAGCGACCGATATAGAAATGCATATG
TATGGGCCCCAGGTGCCCTCAAAGTACTCGAGTGTCACTGGGAGAAGTACAACAATAGGTACACAGAGAG
CAGAAGCTTCAGCTACATTGAATTCCATTGTGGCGTAGATGGATATGTTGATAACATAGAAGACCTGAGG
ATTATAGAACCTATCAGCAACTAG

Translation (147 aa):
MTSSLKIWGILLALLCILCRLCVYSNNIYWREFIKLHYLSPSREFKEYKCDVLMREKEALKGKSFHMFIY
SLWFKIQRACINEKGSDRYRNAYVWAPGALKVLECHWEKYNNRYTESRSFSYIEFHCGVDGYVDNIEDLR
IIEPISN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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