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Report for CCDS10899.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
10899.1 Public Homo sapiens 16 CALB2 24 110 108 CCDS HistoryNCBI Gene:794Re-query CCDS DB by CCDS ID:10899.1Re-query CCDS DB by GeneID:794See the combined annotation on chromosome 16 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 10899.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000302628.9 ENSP00000307508.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000302628.9Link to Ensembl Protein Viewer:ENSP00000307508.4Re-query CCDS DB by Nucleotide ID:ENST00000302628Re-query CCDS DB by Protein ID:ENSP00000307508
Original member Current member NCBI NM_001740.5 NP_001731.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001740.5Link to Protein Sequence:NP_001731.2Re-query CCDS DB by Nucleotide ID:NM_001740Re-query CCDS DB by Protein ID:NP_001731Link to BLAST:NP_001731.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001731.2 271 P22676 271 100% 0 0

Chromosomal Locations for CCDS 10899.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 16 (NC_000016.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16See the combined annotation on chromosome 16 in Sequence Viewer

Chromosome Start Stop Links
16 71358793 71358886 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71372153 71372229 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71374745 71374834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71377667 71377747 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71382719 71382775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71383367 71383444 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71383970 71384025 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71384339 71384378 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71384783 71384836 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71385577 71385648 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16
16 71389749 71389865 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 16Link to Ensembl Genome Browser on chromosome 16

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (816 nt):
ATGGCTGGCCCGCAGCAGCAGCCCCCTTACCTGCACCTGGCCGAGCTGACGGCGTCCCAGTTCCTGGAAA
TATGGAAGCACTTTGACGCAGACGGAAATGGGTATATTGAAGGTAAAGAGCTAGAAAACTTTTTCCAAGA
GCTGGAGAAGGCAAGGAAAGGCTCTGGCATGATGTCAAAGAGTGACAACTTTGGAGAAAAGATGAAGGAG
TTCATGCAGAAGTATGATAAAAACTCAGATGGGAAAATCGAGATGGCAGAGCTGGCGCAGATCCTGCCAA
CCGAAGAGAACTTCCTTCTGTGCTTCAGGCAGCACGTGGGCTCCAGCGCCGAGTTTATGGAGGCTTGGCG
GAAGTACGACACAGACAGGAGTGGCTACATCGAAGCCAATGAGCTCAAGGGATTCCTGTCAGACCTGCTG
AAGAAGGCGAACCGGCCGTACGATGAGCCCAAGCTCCAGGAATACACCCAAACCATACTACGGATGTTTG
ACTTGAACGGGGATGGCAAATTGGGCCTCTCAGAGATGTCCCGACTCCTGCCTGTCCAGGAAAACTTCCT
GCTTAAATTTCAGGGCATGAAGCTGACCTCAGAGGAGTTTAACGCGATCTTCACATTTTACGACAAGGAT
AGAAGCGGCTACATTGACGAGCATGAGCTGGATGCCCTTTTGAAGGATCTGTACGAGAAAAACAAAAAGG
AAATGAATATTCAACAGCTCACCAACTACAGAAAGAGCGTCATGTCCTTGGCAGAGGCAGGGAAGCTCTA
CCGCAAGGACCTGGAGATTGTGCTCTGCAGCGAGCCCCCCATGTAA

Translation (271 aa):
MAGPQQQPPYLHLAELTASQFLEIWKHFDADGNGYIEGKELENFFQELEKARKGSGMMSKSDNFGEKMKE
FMQKYDKNSDGKIEMAELAQILPTEENFLLCFRQHVGSSAEFMEAWRKYDTDRSGYIEANELKGFLSDLL
KKANRPYDEPKLQEYTQTILRMFDLNGDGKLGLSEMSRLLPVQENFLLKFQGMKLTSEEFNAIFTFYDKD
RSGYIDEHELDALLKDLYEKNKKEMNIQQLTNYRKSVMSLAEAGKLYRKDLEIVLCSEPPM


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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