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Report for CCDS32803.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
32803.1 Public Homo sapiens 18 RMC1 24 110 108 CCDS HistoryNCBI Gene:29919Re-query CCDS DB by CCDS ID:32803.1Re-query CCDS DB by GeneID:29919See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 32803.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000269221.8 ENSP00000269221.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000269221.8Link to Ensembl Protein Viewer:ENSP00000269221.2Re-query CCDS DB by Nucleotide ID:ENST00000269221Re-query CCDS DB by Protein ID:ENSP00000269221
Original member Current member NCBI NM_013326.5 NP_037458.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013326.5Link to Protein Sequence:NP_037458.3Re-query CCDS DB by Nucleotide ID:NM_013326Re-query CCDS DB by Protein ID:NP_037458Link to BLAST:NP_037458.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_037458.3 657 Q96DM3 657 100% 0 0

Chromosomal Locations for CCDS 32803.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 23503619 23503720 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23504371 23504447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23506970 23507054 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23507985 23508041 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23509193 23509279 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23515856 23515996 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23516320 23516423 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23518890 23518979 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23519069 23519174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23520202 23520313 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23524130 23524174 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23524429 23524482 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23526637 23526765 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23527795 23527901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23529179 23529298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23529635 23529712 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530028 23530132 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530229 23530297 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23530387 23530612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 23531625 23531704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1974 nt):
ATGGGCGAGGAGGACTACTATCTGGAGCTGTGCGAGCGGCCGGTGCAGTTCGAGAAGGCGAACCCTGTCA
ACTGCGTCTTCTTCGATGAGGCCAACAAGCAGGTTTTTGCTGTTCGATCTGGTGGAGCTACTGGCGTGGT
AGTTAAAGGCCCAGATGATAGGAATCCCATCTCATTTAGAATGGATGACAAAGGAGAAGTGAAGTGCATT
AAGTTTTCCTTAGAAAATAAGATATTGGCTGTTCAGAGGACCTCAAAGACTGTGGATTTTTGTAATTTTA
TCCCTGATAATTCCCAGCTGGAATACACACAGGAGTGCAAGACTAAGAATGCCAACATTCTAGGATTCTG
CTGGACTAGTTCAACTGAAATTGTCTTCATAACAGATCAAGGAATCGAATTTTACCAGGTATTACCAGAG
AAACGGAGTCTGAAACTCTTGAAGAGCCACAATCTCAATGTGAATTGGTACATGTACTGCCCCGAGAGCG
CCGTGATCTTGCTGTCTACCACGGTCCTGGAGAATGTCCTGCAGCCTTTTCACTTTAGGGCTGGCACTAT
GTCGAAGCTGCCCAAATTTGAGATTGAATTACCAGCTGCGCCTAAGTCAACTAAACCCAGCCTTTCCGAA
AGAGACATCGCAATGGCTACCATATACGGGCAGCTGTATGTTCTCTTCTTGAGGCATCATTCTCGGACCT
CCAACAGCACAGGAGCGGAGGTGGTCCTCTATCATCTACCACGAGAAGGTGCCTGTAAAAAGATGCACAT
ATTGAAGTTAAATAGGACGGGAAAGTTTGCCCTGAACGTGGTGGACAACCTGGTAGTCGTGCATCATCAG
GATACAGAGACATCGGTAATATTCGATATCAAGTTACGGGGAGAGTTTGACGGCTCCGTTACCTTCCACC
ACCCCGTGCTTCCCGCTCGATCGATCCAGCCCTATCAGATCCCCATCACAGGTCCTGCTGCCGTGACCAG
CCAGTCTCCTGTTCCATGTAAACTCTATTCTTCATCTTGGATTGTCTTTCAACCTGACATCATTATCAGC
GCAAGCCAAGGTTACCTCTGGAACCTCCAAGTGAAACTTGAGCCCATAGTAAATCTCTTACCAGACAAAG
GAAGACTCATGGACTTTCTCCTCCAGAGAAAGGAATGCAAGATGGTCATCCTGTCTGTCTGTTCACAGAT
GTTAAGTGAGTCAGACAGAGCATCGCTGCCCGTGATAGCCACTGTTTTTGATAAACTCAACCATGAGTAT
AAAAAGTACCTGGATGCCGAGCAGAGTTATGCGATGGCGGTGGAAGCAGGGCAGAGCCGAAGCAGCCCGC
TCCTCAAGAGGCCGGTGCGGACCCAGGCGGTGCTGGACCAGTCAGATGTGTACACCCATGTCCTGTCAGC
CTTTGTGGAAAAGAAGGAGATGCCTCATAAATTTGTGATAGCCGTGCTGATGGAATACATTCGTTCTCTT
AACCAGTTTCAGATTGCAGTACAGCATTACCTACATGAACTTGTTATCAAAACCCTTGTCCAGCACAACC
TCTTTTATATGCTGCATCAGTTCCTGCAGTACCACGTCCTCAGCGACTCCAAACCTTTGGCTTGTCTGCT
GTTATCCCTAGAGAGTTTCTATCCTCCTGCTCATCAGCTATCTCTGGACATGCTGAAGCGACTTTCAACA
GCAAATGATGAAATAGTAGAAGTTCTCCTTTCCAAACACCAAGTGTTAGCTGCCTTAAGGTTTATCCGGG
GCATTGGTGGCCATGACAACATTTCTGCACGAAAATTTTTAGATGCTGCAAAGCAGACTGAAGACAACAT
GCTTTTCTATACAATATTCCGCTTTTTTGAACAGCGAAACCAGCGTTTGCGAGGGAGCCCCAATTTCACA
CCAGGGGAACACTGTGAAGAACATGTTGCTTTTTTCAAACAGATTTTTGGAGACCAAGCTCTAATGAGGC
CTACAACATTCTGA

Translation (657 aa):
MGEEDYYLELCERPVQFEKANPVNCVFFDEANKQVFAVRSGGATGVVVKGPDDRNPISFRMDDKGEVKCI
KFSLENKILAVQRTSKTVDFCNFIPDNSQLEYTQECKTKNANILGFCWTSSTEIVFITDQGIEFYQVLPE
KRSLKLLKSHNLNVNWYMYCPESAVILLSTTVLENVLQPFHFRAGTMSKLPKFEIELPAAPKSTKPSLSE
RDIAMATIYGQLYVLFLRHHSRTSNSTGAEVVLYHLPREGACKKMHILKLNRTGKFALNVVDNLVVVHHQ
DTETSVIFDIKLRGEFDGSVTFHHPVLPARSIQPYQIPITGPAAVTSQSPVPCKLYSSSWIVFQPDIIIS
ASQGYLWNLQVKLEPIVNLLPDKGRLMDFLLQRKECKMVILSVCSQMLSESDRASLPVIATVFDKLNHEY
KKYLDAEQSYAMAVEAGQSRSSPLLKRPVRTQAVLDQSDVYTHVLSAFVEKKEMPHKFVIAVLMEYIRSL
NQFQIAVQHYLHELVIKTLVQHNLFYMLHQFLQYHVLSDSKPLACLLLSLESFYPPAHQLSLDMLKRLST
ANDEIVEVLLSKHQVLAALRFIRGIGGHDNISARKFLDAAKQTEDNMLFYTIFRFFEQRNQRLRGSPNFT
PGEHCEEHVAFFKQIFGDQALMRPTTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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