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Report for CCDS1919.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
1919.1 Public Homo sapiens 2 CYP26B1 24 110 108 CCDS HistoryNCBI Gene:56603Re-query CCDS DB by CCDS ID:1919.1Re-query CCDS DB by GeneID:56603See the combined annotation on chromosome 2 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 1919.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000001146.7 ENSP00000001146.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000001146.7Link to Ensembl Protein Viewer:ENSP00000001146.2Re-query CCDS DB by Nucleotide ID:ENST00000001146Re-query CCDS DB by Protein ID:ENSP00000001146
Original member Current member NCBI NM_019885.4 NP_063938.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_019885.4Link to Protein Sequence:NP_063938.1Re-query CCDS DB by Nucleotide ID:NM_019885Re-query CCDS DB by Protein ID:NP_063938Link to BLAST:NP_063938.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_063938.1 512 Q9NR63-1 512 100% 0 0

Chromosomal Locations for CCDS 1919.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 2 (NC_000002.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2See the combined annotation on chromosome 2 in Sequence Viewer

Chromosome Start Stop Links
2 72132227 72132619 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72133023 72133307 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72134761 72134916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72135144 72135419 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72143989 72144213 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2
2 72147631 72147834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 2Link to Ensembl Genome Browser on chromosome 2

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1539 nt):
ATGCTCTTTGAGGGCTTGGATCTGGTGTCGGCGCTGGCCACCCTCGCCGCGTGCCTGGTGTCCGTGACGC
TGCTGCTGGCCGTGTCGCAGCAGCTGTGGCAGCTGCGCTGGGCCGCCACTCGCGACAAGAGCTGCAAGCT
GCCCATCCCCAAGGGATCCATGGGCTTCCCGCTCATCGGAGAGACCGGCCACTGGCTGCTGCAGGGTTCT
GGCTTCCAGTCGTCGCGGAGGGAGAAGTATGGCAACGTGTTCAAGACGCATTTGTTGGGGCGGCCGCTGA
TACGCGTGACCGGCGCGGAGAACGTGCGCAAGATCCTCATGGGCGAGCACCACCTCGTGAGCACCGAGTG
GCCTCGCAGCACCCGCATGTTGCTGGGCCCCAACACGGTGTCCAATTCCATTGGCGACATCCACCGCAAC
AAGCGCAAGGTCTTCTCCAAGATCTTCAGCCACGAGGCCCTGGAGAGTTACCTGCCCAAGATCCAGCTGG
TGATCCAGGACACACTGCGCGCCTGGAGCAGCCACCCCGAGGCCATCAACGTGTACCAGGAGGCGCAGAA
GCTGACCTTCCGCATGGCCATCCGGGTGCTGCTGGGCTTCAGCATCCCTGAGGAGGACCTTGGGCACCTC
TTTGAGGTCTACCAGCAGTTTGTGGACAATGTCTTCTCCCTGCCTGTCGACCTGCCCTTCAGTGGCTACC
GGCGGGGCATTCAGGCTCGGCAGATCCTGCAGAAGGGGCTGGAGAAGGCCATCCGGGAGAAGCTGCAGTG
CACACAGGGCAAGGACTACTTGGACGCCCTGGACCTCCTCATTGAGAGCAGCAAGGAGCACGGGAAGGAG
ATGACCATGCAGGAGCTGAAGGACGGGACCCTGGAGCTGATCTTTGCGGCCTATGCCACCACGGCCAGCG
CCAGCACCTCACTCATCATGCAGCTGCTGAAGCACCCCACTGTGCTGGAGAAGCTGCGGGATGAGCTGCG
GGCTCATGGCATCCTGCACAGTGGCGGCTGCCCCTGCGAGGGCACACTGCGCCTGGACACGCTCAGTGGG
CTGCGCTACCTGGACTGCGTCATCAAGGAGGTCATGCGCCTGTTCACGCCCATTTCCGGCGGCTACCGCA
CTGTGCTGCAGACCTTCGAGCTTGATGGTTTCCAGATCCCCAAAGGCTGGAGTGTCATGTATAGCATCCG
GGACACCCATGACACAGCGCCCGTGTTCAAAGACGTGAACGTGTTCGACCCCGATCGCTTCAGCCAGGCG
CGGAGCGAGGACAAGGATGGCCGCTTCCATTACCTCCCGTTCGGTGGCGGTGTCCGGACCTGCCTGGGCA
AGCACCTGGCCAAGCTGTTCCTGAAGGTGCTGGCGGTGGAGCTGGCTAGCACCAGCCGCTTTGAGCTGGC
CACACGGACCTTCCCCCGCATCACCTTGGTCCCCGTCCTGCACCCCGTGGATGGCCTCAGCGTCAAGTTC
TTTGGCCTGGACTCCAACCAGAACGAGATCCTGCCGGAGACGGAGGCCATGCTGAGCGCCACAGTCTAA

Translation (512 aa):
MLFEGLDLVSALATLAACLVSVTLLLAVSQQLWQLRWAATRDKSCKLPIPKGSMGFPLIGETGHWLLQGS
GFQSSRREKYGNVFKTHLLGRPLIRVTGAENVRKILMGEHHLVSTEWPRSTRMLLGPNTVSNSIGDIHRN
KRKVFSKIFSHEALESYLPKIQLVIQDTLRAWSSHPEAINVYQEAQKLTFRMAIRVLLGFSIPEEDLGHL
FEVYQQFVDNVFSLPVDLPFSGYRRGIQARQILQKGLEKAIREKLQCTQGKDYLDALDLLIESSKEHGKE
MTMQELKDGTLELIFAAYATTASASTSLIMQLLKHPTVLEKLRDELRAHGILHSGGCPCEGTLRLDTLSG
LRYLDCVIKEVMRLFTPISGGYRTVLQTFELDGFQIPKGWSVMYSIRDTHDTAPVFKDVNVFDPDRFSQA
RSEDKDGRFHYLPFGGGVRTCLGKHLAKLFLKVLAVELASTSRFELATRTFPRITLVPVLHPVDGLSVKF
FGLDSNQNEILPETEAMLSATV


Links Key
 Links to:   History report
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  Nucleotide report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
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