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Report for CCDS59615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
59615.1 Public Mus musculus 14 Kat6b 23 108 98 CCDS HistoryNCBI Gene:54169Re-query CCDS DB by CCDS ID:59615.1Re-query CCDS DB by GeneID:54169See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 13, NCBI annotation release 103, Ensembl annotation release 72

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 59615.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000182405.8 ENSMUSP00000138377.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182405.8Link to Ensembl Protein Viewer:ENSMUSP00000138377.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182405Re-query CCDS DB by Protein ID:ENSMUSP00000138377
Original member Current member EBI ENSMUST00000182855.7 ENSMUSP00000138511.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000182855.7Link to Ensembl Protein Viewer:ENSMUSP00000138511.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000182855Re-query CCDS DB by Protein ID:ENSMUSP00000138511
Original member NCBI NM_001205241.1 NP_001192170.1 Updated not alive Link to Nucleotide Sequence:NM_001205241.1Link to Protein Sequence:NP_001192170.1Re-query CCDS DB by Nucleotide ID:NM_001205241Re-query CCDS DB by Protein ID:NP_001192170
Current member NCBI NM_001205241.2 NP_001192170.1 Accepted alive Link to Nucleotide Sequence:NM_001205241.2Link to Protein Sequence:NP_001192170.1Re-query CCDS DB by Nucleotide ID:NM_001205241Re-query CCDS DB by Protein ID:NP_001192170Link to BLAST:NP_001192170.1
Original member NCBI NM_017479.3 NP_059507.2 Updated not alive Link to Nucleotide Sequence:NM_017479.3Link to Protein Sequence:NP_059507.2Re-query CCDS DB by Nucleotide ID:NM_017479Re-query CCDS DB by Protein ID:NP_059507
Current member NCBI NM_017479.4 NP_059507.2 Accepted alive Link to Nucleotide Sequence:NM_017479.4Link to Protein Sequence:NP_059507.2Re-query CCDS DB by Nucleotide ID:NM_017479Re-query CCDS DB by Protein ID:NP_059507Link to BLAST:NP_059507.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001192170.1 1763 Q8BRB7-2 1763 100% 0 0
NP_059507.2 1763 Q8BRB7-2 1763 100% 0 0

Chromosomal Locations for CCDS 59615.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 21516875 21517498 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21609754 21609862 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21618891 21619006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21619218 21619299 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21621955 21622087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21624833 21624888 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21626719 21626840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21628813 21628928 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21631322 21631463 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21634476 21634637 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21637547 21637640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21660743 21660974 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21661428 21661587 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21662158 21662466 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21664457 21664748 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 21668331 21670873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (5292 nt):
ATGGTAAAACTTGCAAACCCACTTTACACAGAGTGGATTCTTGAAGCAGTGCAGAAAATCAAGAAGCAGA
AGCAGCGGCCCTCAGAAGAGAGGATCTGCCATGCGGTCAGCACGTCCCATGGGTTGGACAAGAAAACAGT
CTCGGAACAGCTGGAACTTAGTGTTCAGGATGGCTCCGTTCTCAAAGTCACCAACAAAGGCCTTGCTTCA
TATAAGGACCCAGACAATCCTGGGCGTTTTTCATCGGTTAAACCGGGCACTTTCCCCAAGCCAACCAAGG
GGTCCAAAGGACCGCCGTGTAATGATCTACGCAATGTGGATTGGAATAAACTTTTAAAGAGAGCAATCGA
AGGCCTTGAGGAGCCAAACGGCTCCTCCTTGAAGAACATTGAGAAGTATCTGAGAAGCCAGAGTGATCTT
ACAGGCACCACCAACCATCCAGCCTTTCAGCAGAGGTTGCGGCTAGGGGCCAAGCGTGCTGTGAACAATG
GGAGGTTACTGAAGGAAGGACCACAGTACAGGGTCAATAGTGGGAGCTCAGATGGCAAAGGGGCGCCCCA
GTACCCCAGTGCTTTTCCGTCCTCACTCCCGCCCGTCAGCCTTCTACCCCATGAGAAAGACCAGCCCCGT
GCCGATCCCATTCCAATATGTAGCTTCTGTTTGGGGACTAAAGAGTCAAATCGTGAAAAGAAACCAGAAG
AACTCCTGTCTTGTGCAGATTGTGGCAGTAGTGGACACCCATCCTGTCTGAAGTTTTGTCCTGAGTTAAC
CGCAAATGTGAAGGCCTTGAGGTGGCAGTGCATCGAGTGCAAGACGTGCAGCGCATGTCGAGTCCAGGGC
AAAAATGCAGATAACATGCTTTTTTGTGATTCCTGTGATAGAGGATTCCATATGGAGTGCTGTGACCCAC
CACTTTCCAGAATGCCAAAAGGGATGTGGATTTGCCAAGTCTGCAGACCAAAGAAAAAGGGAAGAAAACT
ACTTCATGAGAAAGCTGCACAAATAAAACGGCGATATGCAAAACCCATTGGACGACCGAAAAATAAATTA
AAGCAACGATTGTTGTCTGTAACCAGTGATGAAGGATCCATGAGTGCATTCACAGGAAGGGGGTCACCTG
ATACTGATATTAAAATAAGCATCAAACAAGAAAGTGCAGATGTGAGTCTGGTGGGAAACAAGGAGCTCGT
GACTGAAGAGGATCTGGACGTTTTTAAGCAGGCCCAGGAACTGTCTTGGGAGAAAATAGAGTGTGAAAGT
GGAGTGGAAGACTGTGGTCGGTACCCCTCAGTAATAGAGTTCGGGAAATACGAGATCCAAACCTGGTACT
CCTCGCCTTACCCACAGGAATATGCAAGATTACCAAAGCTTTACCTGTGTGAATTCTGTCTTAAATATAT
GAAGAGTAAAAATATTTTGCTAAGACACTCAAAGAAGTGTGGATGGTTTCATCCTCCGGCCAATGAGATT
TACCGAAGGAAAGACCTTTCAGTATTCGAGGTTGATGGGAATATGAGTAAAATTTATTGCCAAAACCTTT
GCTTGTTAGCCAAGCTCTTCCTGGACCACAAAACATTGTATTATGATGTTGAGCCATTCCTTTTTTATGT
CCTTACAAAAAATGATGAAAAAGGCTGTCATCTGGTTGGATACTTCTCCAAGGAAAAGCTCTGCCAGCAG
AAGTATAATGTGTCCTGCATAATGATCATGCCCCAGCACCAAAGGCAAGGATTTGGACGCTTTCTCATTG
ATTTCAGCTATTTGCTTTCTCGAAGAGAAGGCCAAGCAGGGTCTCCCGAAAAGCCGCTCTCTGACCTGGG
CCGGCTCTCCTACCTGGCCTACTGGAAAAGTGTCATCTTGGAATACCTCTACCGCCACCACGAGAGGCAC
ATCAGCATCAAGGCCATTAGCAGAGCCACAGGCATGTGCCCACATGACATCGCCACCACTCTGCAGCACC
TCCACATGATTGACAGGAGGGATGGCAGGTTTGTCATCATTAGAAGGGAAAAGTTGATATTGGGCCACAT
GGAAAAGCTGAAGAACTGTTCCCGACCCAATGAACTTGATCCGGAGAGTCTAAGATGGACCCCAATGTTA
ATTTCTAATGCTGTGGTTTCTGAGGAAGAGCGAGAAGCTGAGAAGGAGGCTGAACGACTAATGGAACAAG
CCAGCTGCTGGGAGAAGGAGGAGCAAGAGATCCTGTCGTCCAGAGTTAGCAGTAGGCAATCGTCTGCAAA
AGTACAATCAAAGAATAAGTACCTGCACTCCCCAGAGAGGCGGCCAGTGGCCGGGGAGCGAGGACAGTTG
TTAGAGCTGTCCAAAGAGAGCAGTGAGGAAGAGGAGGAGGAGGAGGAGGAAGATGATGAGGAAGAGGAGG
AGGAGGAAGAGGAGGAGAGCATTCAGACATCTCCCCCTCGGTTGACTAAGCCACAGTCAGTTTCCATTAA
AAGAAAGAGGCCTTTTGTAGTAAAGAAGAAAAGGGGTCGTAAACGCAGGAGGATCAACAGCAGTGTCACC
ACCGAGACCATTTCCGAGACGACAGAAGTGCTCAATGAGCCCTTCGACAACTCGGATGAGGAGAGGCCAA
TGCCGCAGCTGGAGCCTACCTGTGAGATCCCAGTGGAGGAGGGCGGCAGGAAGCCAGTTCTGAGGAAAGC
ATTCCCACATCAGCCAGGGAAGAAAAGGCAGACAGAGGAAGAGGAAGGGGAAGACAATCATTTCTTCAAG
ACCGCTGCCCTTTGTAGAAAAGATGTAGATGATGATGCAGAACACTTGAAAGAAGGCAGCAAAGACAATC
CTGAGCCTCTAAAGTGCAGACAAGTGTGGCCAAAAGGAGCGAAGCGAGGGCTCTCCAAGTGGAAGCAAAG
CAAGGAGAGGAAGACGGGCTTCAAGCTGAACCTGTACACCCCACCAGAGACACCCATGGAGCCAGAGGAC
CAGGTGACGATCGAAGAGCAGAAGGAGCTTTCAGAGGACAAGGGCAGCCCCGTGGGGATGGAACGGGAGG
TGACAGAGACCGTGGATGCCTTGCTGCCTCAGGAGGGGAGCAGAAGGGAAGAGACAGGCATACCCGTGAG
TCCACATAAATCACCAGGTGGAAAGGTAGATGAGGAGGACCTCATCAGAGGTGAGGAGGAGGGAGAGGAA
GAGGGAGAGGAGGAGGGAGAACGAGAAGAACAGGAAGAGGAAGAAGAAGTAACTACAGAAAAAGACCTAG
ATGGTGCTAAAAGTAAAGAGAACCCGGAGCCTGAGATCTCCATGGAAAAGGAAGACCCTGTGCATCTGGG
TGACCATGAAGAGGACGAGGATGAGGAGGAAGAGCCATCTCACAATGAGGACCATGATGCAGATGATGAA
GATGATGGCCACATGGAGGCTGCCAACATGGAGAGGGGAGACCTCCCAAGAGAAACCTTCAAAGACGCAC
TAGAGGGCCAGGAGGCTTTTTTAGACCTGAGCATTCAGCCGAGTCACTCGAACCCTGAAGTCTTGATGAA
CTGCGGTGTTGATCTCACAATGTCCTGTAACAGTGAGCCAAAGGAGCTTGCTGGGGACACTGGAACTGCA
CCTGAGTCTGACGCGGAGCCCCCGGAAGAACAGACACAGAAGCAGGACCAAAAGAACAGCGATGGTGTGG
ATGCTGAGCTCGAAGAGGGAGGCCCAGCCGCTGTGGAAATTGACTCCGAGACCGCCCAGGCTGTTCAGTC
TTTGACCCAAGAAAACAGGGAGCACGATGACACCTTTCCAGATTGTGCTGAGACTCAAGAGGCCTGTAGA
AGCCTGCAGAACTATACACACACAGACCAAAGTCCTCAAATTGCCACCACGCTGGACGAGTGCCAACAGT
CAGACCACAGTAGCCCAGTTTCATCTGTCCATTCCCATCCTGGCCAGTCAGTTCGTTCTGTCAATAGCCC
CAGTGTCCCTGCCCTAGAGAATAGCTATGCCCAAATCAGCCCCGATCAGACTGCCATCACAGTGCCACCT
CTGCAGAACATGGAGACCAGTCCAATGATGGACGTCCCGTCAGTGTCAGATCACTCACAGCAGGTCGTTG
ACAGCGGATTCAGTGACCTGGGCAGTATTGAGAGCACAACAGAGAACTATGAGAACCCAAGCAGCTATGA
CTCAACCATGGGAGGCAGTATCTGTGGAAACGGCTCTTCCCAGAACAGCTGCTCCTACAGCAGTCTCACC
TCTAGCAATCTGACACAGAACAGCTGTGCTGTCACCCAGCAGATGTCCAACATCAGTGGGAGCTGCAGCA
TGCTGCAGCAGACCAGCATCAGCTCCCCTCCAACCTGCAGCGTCAAGTCTCCCCAAGGCTGTGTGGTGGA
GAGGCCTCCCAGTAGCAGCCAGCAGCTGGCTCAGTGCAGCATGGCCGCCAATTTCACCCCACCCATGCAG
CTGGCTGACATCCCCGAGACCAGCAATGCCAACATTGGCTTATATGAGCGAATGGGTCAAAGTGATTTTG
GGGCTGGGCACTACCCACAGCCATCTGCCACCTTCAGCCTTGCCAAACTGCAGCAGTTAACTAATACACT
TATTGATCATTCATTGCCTTACAGCCATTCCGCTGCTGTGACCTCCTATGCAAACAGTGCCTCTTTGTCC
ACACCATTAAGTAACACAGGGCTTGTTCAGCTTTCGCAGTCTCCACACTCTGTCCCTGGAGGGCCCCAAG
CACAAGCTACCATGACCCCACCCCCTAACCTGACTCCTCCTCCCATGAATCTGCCACCACCTCTCCTGCA
GCGGAACATGGCTGCATCAAATATTGGCATCTCCCACAGCCAAAGACTGCAAACTCAGATTGCCAGCAAG
GGCCACGTCTCCATGAGAACCAAGGCGGCATCTCTGTCACCAGCTGCCGCCACCCATCAGTCACAAATCT
ATGGGCGTTCCCAGACTGTAGCCATGCAGGGTCCTGCACGGACTTTAACGATGCAAAGAGGCATGAACAT
GAGTGTGAACTTGATGCCAGCGCCAGCCTACAATGTCAACTCGGTGAACATGAACATGAACACTCTGAAT
GCCATGAATGGGTATAGCATGTCCCAGCCGATGATGAACAGTGGTTACCACAGCAACCACGGCTATATGA
ATCAAACCCCCCAGTACCCTATGCAGATGCAGATGGGCATGATGGGAAGCCAGCCATACGCCCAGCAGCC
AATGCAGACCCCACCCCACGCTAACATGATGTACACGGCCCCCGGACACCACGGCTACATGAACACAGGC
ATGTCCAAACAGTCTCTCAATGGGTCCTACATGAGAAGGTAG

Translation (1763 aa):
MVKLANPLYTEWILEAVQKIKKQKQRPSEERICHAVSTSHGLDKKTVSEQLELSVQDGSVLKVTNKGLAS
YKDPDNPGRFSSVKPGTFPKPTKGSKGPPCNDLRNVDWNKLLKRAIEGLEEPNGSSLKNIEKYLRSQSDL
TGTTNHPAFQQRLRLGAKRAVNNGRLLKEGPQYRVNSGSSDGKGAPQYPSAFPSSLPPVSLLPHEKDQPR
ADPIPICSFCLGTKESNREKKPEELLSCADCGSSGHPSCLKFCPELTANVKALRWQCIECKTCSACRVQG
KNADNMLFCDSCDRGFHMECCDPPLSRMPKGMWICQVCRPKKKGRKLLHEKAAQIKRRYAKPIGRPKNKL
KQRLLSVTSDEGSMSAFTGRGSPDTDIKISIKQESADVSLVGNKELVTEEDLDVFKQAQELSWEKIECES
GVEDCGRYPSVIEFGKYEIQTWYSSPYPQEYARLPKLYLCEFCLKYMKSKNILLRHSKKCGWFHPPANEI
YRRKDLSVFEVDGNMSKIYCQNLCLLAKLFLDHKTLYYDVEPFLFYVLTKNDEKGCHLVGYFSKEKLCQQ
KYNVSCIMIMPQHQRQGFGRFLIDFSYLLSRREGQAGSPEKPLSDLGRLSYLAYWKSVILEYLYRHHERH
ISIKAISRATGMCPHDIATTLQHLHMIDRRDGRFVIIRREKLILGHMEKLKNCSRPNELDPESLRWTPML
ISNAVVSEEEREAEKEAERLMEQASCWEKEEQEILSSRVSSRQSSAKVQSKNKYLHSPERRPVAGERGQL
LELSKESSEEEEEEEEEDDEEEEEEEEEESIQTSPPRLTKPQSVSIKRKRPFVVKKKRGRKRRRINSSVT
TETISETTEVLNEPFDNSDEERPMPQLEPTCEIPVEEGGRKPVLRKAFPHQPGKKRQTEEEEGEDNHFFK
TAALCRKDVDDDAEHLKEGSKDNPEPLKCRQVWPKGAKRGLSKWKQSKERKTGFKLNLYTPPETPMEPED
QVTIEEQKELSEDKGSPVGMEREVTETVDALLPQEGSRREETGIPVSPHKSPGGKVDEEDLIRGEEEGEE
EGEEEGEREEQEEEEEVTTEKDLDGAKSKENPEPEISMEKEDPVHLGDHEEDEDEEEEPSHNEDHDADDE
DDGHMEAANMERGDLPRETFKDALEGQEAFLDLSIQPSHSNPEVLMNCGVDLTMSCNSEPKELAGDTGTA
PESDAEPPEEQTQKQDQKNSDGVDAELEEGGPAAVEIDSETAQAVQSLTQENREHDDTFPDCAETQEACR
SLQNYTHTDQSPQIATTLDECQQSDHSSPVSSVHSHPGQSVRSVNSPSVPALENSYAQISPDQTAITVPP
LQNMETSPMMDVPSVSDHSQQVVDSGFSDLGSIESTTENYENPSSYDSTMGGSICGNGSSQNSCSYSSLT
SSNLTQNSCAVTQQMSNISGSCSMLQQTSISSPPTCSVKSPQGCVVERPPSSSQQLAQCSMAANFTPPMQ
LADIPETSNANIGLYERMGQSDFGAGHYPQPSATFSLAKLQQLTNTLIDHSLPYSHSAAVTSYANSASLS
TPLSNTGLVQLSQSPHSVPGGPQAQATMTPPPNLTPPPMNLPPPLLQRNMAASNIGISHSQRLQTQIASK
GHVSMRTKAASLSPAAATHQSQIYGRSQTVAMQGPARTLTMQRGMNMSVNLMPAPAYNVNSVNMNMNTLN
AMNGYSMSQPMMNSGYHSNHGYMNQTPQYPMQMQMGMMGSQPYAQQPMQTPPHANMMYTAPGHHGYMNTG
MSKQSLNGSYMRR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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