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Report for CCDS79263.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
79263.1 Public Mus musculus 14 Fhit 23 108 98 CCDS HistoryNCBI Gene:14198Re-query CCDS DB by CCDS ID:79263.1Re-query CCDS DB by GeneID:14198See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 79263.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000160340.7 ENSMUSP00000124017.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000160340.7Link to Ensembl Protein Viewer:ENSMUSP00000124017.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000160340Re-query CCDS DB by Protein ID:ENSMUSP00000124017
Original member NCBI NM_001308285.1 NP_001295214.1 Updated not alive Link to Nucleotide Sequence:NM_001308285.1Link to Protein Sequence:NP_001295214.1Re-query CCDS DB by Nucleotide ID:NM_001308285Re-query CCDS DB by Protein ID:NP_001295214
Current member NCBI NM_001308285.2 NP_001295214.1 Accepted alive Link to Nucleotide Sequence:NM_001308285.2Link to Protein Sequence:NP_001295214.1Re-query CCDS DB by Nucleotide ID:NM_001308285Re-query CCDS DB by Protein ID:NP_001295214Link to BLAST:NP_001295214.1

Chromosomal Locations for CCDS 79263.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 9550393 9550398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 9573413 9573511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 9763740 9763808 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 9862017 9862046 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 9870030 9870175 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 10421495 10421613 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 10729725 10729795 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 10751585 10751686 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (642 nt):
ATGCTCAGCCTACTTTGGAATACCTCCCCACAGTGCAACCAAATGCAAGACGTTGGTGCCTTCAAGATAG
TATTCTACCTGATAGGTTGGACTAATCTGAAGGTGCCCTGGGACAACCTGCTCGGTCACACATCTGCAAG
AACTCTCCATCTTGCACTGAGGACCCCAAGGAGCTTTTACTGTGAGACCATGTCATTTAGATTTGGCCAA
CATCTCATCAAGCCCTCTGTGGTTTTTCTCAAAACTGAACTGTCCTTCGCCCTGGTGAATAGGAAACCCG
TTGTACCTGGCCATGTCCTCGTGTGCCCGCTGAGGCCAGTAGAGCGCTTCCGTGACCTACATCCTGATGA
AGTGGCCGATTTGTTTCAAGTGACCCAGAGAGTTGGGACAGTGGTGGAGAAGCATTTCCAGGGGACCTCC
ATCACCTTCTCCATGCAAGATGGTCCTGAAGCTGGGCAGACTGTGAAGCATGTACATGTCCACGTTCTTC
CCAGGAAGGCAGGGGACTTCCCCCGGAATGACAACATCTATGATGAGCTCCAGAAACATGACAGAGAAGA
AGAGGACTCGCCAGCCTTTTGGAGATCTGAGAAGGAGATGGCTGCAGAGGCGGAGGCTCTGCGGGTCTAC
TTTCAGGCCTGA

Translation (213 aa):
MLSLLWNTSPQCNQMQDVGAFKIVFYLIGWTNLKVPWDNLLGHTSARTLHLALRTPRSFYCETMSFRFGQ
HLIKPSVVFLKTELSFALVNRKPVVPGHVLVCPLRPVERFRDLHPDEVADLFQVTQRVGTVVEKHFQGTS
ITFSMQDGPEAGQTVKHVHVHVLPRKAGDFPRNDNIYDELQKHDREEEDSPAFWRSEKEMAAEAEALRVY
FQA


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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