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Report for CCDS57598.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
57598.1 Public Mus musculus 7 Osbpl5 23 108 98 CCDS HistoryNCBI Gene:79196Re-query CCDS DB by CCDS ID:57598.1Re-query CCDS DB by GeneID:79196See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 10, NCBI annotation release 38.1, Ensembl annotation release 68

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 57598.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000119499.7 ENSMUSP00000113362.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000119499.7Link to Ensembl Protein Viewer:ENSMUSP00000113362.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000119499Re-query CCDS DB by Protein ID:ENSMUSP00000113362
Original member Current member NCBI NM_001199227.1 NP_001186156.1 Accepted alive Link to Nucleotide Sequence:NM_001199227.1Link to Protein Sequence:NP_001186156.1Re-query CCDS DB by Nucleotide ID:NM_001199227Re-query CCDS DB by Protein ID:NP_001186156Link to BLAST:NP_001186156.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186156.1 874 Q9ER64 874 100% 0 0

Chromosomal Locations for CCDS 57598.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 143689819 143689957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143691888 143691990 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143692858 143692984 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143693772 143693898 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143694198 143694383 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143694809 143694945 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143695040 143695129 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143695515 143695612 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143699234 143699332 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143700714 143700810 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143701192 143701290 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143702690 143702771 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143703151 143703335 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143704510 143704702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143704969 143705140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143707346 143707430 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143709008 143709211 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143709539 143709640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143709773 143709853 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143713496 143713578 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 143715666 143715801 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2625 nt):
ATGAAGGAGGAGGCCTTTCTCCGGCGCCGTTTCTCGCTGTGTCCACCAGCTTCTACTCCACAGAAGACTG
ACCCCCGGAAAGTCCCACGGAACCTGCTTCTGGGCTGCGAAAATGAGCTTGGTCCCATCACCCCAGGAAG
GGACATGGAGTCCAACGGCCCATCACAACCCAGAGATGAAGAGCCCCAGACCCCAGGCTCCGCCACGAAG
GTGCCACTGGCTGAGTACAGGCTATGCAATGGATCTGACAAGGAATGTACCTCTCCAACGACCAGGGTCT
CCAAGAAGGATGCTCTCAAGGCACAGAAGGAGAACTATCGGCAGGAGAAGAAGCGGGCCACGAAGCAGCT
GTTCAGTGCCCTGACTGACCCCAGTGTGGTCATCATGGCTGACAGCCTAAAGATCCGAGGGACCCTGAAG
AGCTGGACGAAGCTGTGGTGTGTACTGAAGCCAGGGGTGCTGCTCATTTACAAGACACCCAAGGTGGGCC
AGTGGGTGGGCACGGTGCTGCTGCACTGCTGCGAGCTTATTGAGCGCCCCTCCAAGAAGGACGGCTTCTG
CTTCAAACTCTTCCACCCGCTGGACCAGTCTGTGTGGGCTGTGAAGGGCCCCAAAGGCGAGAGTGTGGGC
TCCATCACTCAGCCCCTCCCTAGCAGCTACCTGATCTTCAGGGCCGCTTCTGAATCAGACGGCCGCTGCT
GGCTAGATGCCCTGGAGCTGGCCCTTCGCTGCTCCAGCCTCCTGCGACTGAGCACGTGCAAGCAGGGTCG
AGATGGGGAGCAGGGGTCCTCGCCTGATGCCTCTCCCTCTTCTCTCTACGGACTGCCCACCTCGGCCACC
ATCCCAGATCAAGACCTGTTCCCGCTGAATGGGTCTGCCTTGGAGAACGATGCATTCTCAGACAAGTCAG
AACGAGAGAATGCAGAAGACTCGGATGCCGAGACCCAGGATCACAGCCGCAAGACCAACGAGAGTGGGAG
CGACCTGCTAGACAGCCCTGGTGGGCCATGGAGGGGAACTACCTATGTGGAACAGGTCCAGGAGGAGCTG
GGAGAGCTGGACGAGACTTCCCAGGTGGAGACAGTGTCAGAGGAAAACAAGAGCCTGATGTGGGTGCTGC
TGCGACAGCTGCGGCCAGGCATGGACCTGTCCCGTGTGGTGCTGCCGACCTTCGTGTTGGAGCCTCGGTC
CTTCCTCGGCAAGCTCTCTGATTACTACTACCACGGAGACCTGCTCTCCAGGGCAGCAGCAGAGGATGAC
CCCTACTGCCGCATGAAGCTTGTGCTCCGGTGGTACCTGTCTGGCTTCTATAAGAAGCCCAAGGGCATCA
AGAAACCCTATAATCCCATTCTGGGGGAGACTTTTCGCTGCCGCTGGCTGCACCCTCAGACCAACAGTCA
CACCTTCTACATAGCAGAACAGGTGTCTCACCATCCTCCTGTGTCTGCCTTCTATGTCAGCAACAGGAAA
GATGGCTTCTGCATGAGTGGCAGCATCACAGCAAAGTCTAAGTTCTATGGGAACTCATTGTCGGCGCTTC
TGGACGGCAAGGCTAAACTCACCTTCCTTAATCGCAAGGAGGAGTATACCCTCACCATGCCCTATGCCCA
CTGCCGAGGGATCCTCTACGGCACCATGACCATGGAGCTGGGAGGCAAAGTGAACATCGAGTGTGAGAAG
AACAACCTCCAAGCTGAACTGGACTTCAAGCTCAAGCCTTTCTTTGGAAGCAGCGCCAACATCAACCAGA
TTTCCGGGAAGATCATGTCAGGAGAGGAAGTCCTGGCACGCCTCACTGGACACTGGGACAGAGATGTATT
TATCAAGGAAGAGAGCAGTGGAGGCACCGAGCTCTTCTGGACTCCGAGTGAGGAGGTCCGCAGGCAGCGG
CTGAAGCGGCACACAGTGCTGTTGGAAGAGCAGAGTGAACTGGAGTCTGAGAGGCTGTGGCAGCATGTCA
CCAGGGCCATCCGTGAGGGTGACCAGCACAAAGCCACACAGGAGAAGTCTGTGCTGGAAGAGGCGCAGCG
GCAGCGTGCCCGTGAGCACCAGCAGAGCCTCACTCCATGGAAGCCACAGTTGTTCTTACTGGACCCTCTC
ACTCAGGAATGGCGCTACCGATATGAGGACCTCAGCCCCTGGGACCCGCTGAAGGACATTGCCCAATATG
AGCAAGATGGGATTCTTCATACTCTACAGAGGGAGACTATGTCTGGCCAGACAACCTTTCTGGGGAGTCC
TGACTCCAGGCACAAGAGGCCTAGCTCTGATCGGCGGCTCCGCAAAGCCAGTGACCAGCCCTCTGGCCAT
AGCCAGGTCACTGAGAGCAGCGGCTCCACACCTGAGTCCTGCCCAGACCTCTCTGATGAGGACTTTGTTC
CTGGTGGTGAGAGCCCATGTCCTCGGTGCAGGCGAGAGGTACACCGGCTAAAGATGCTACAAGAGGCCGT
GCTGTCCATTCAGGAAGCTCAGCAAGAGCTGCATAGGCACCTTTCGACCATGTTAAGCTCCACAGTGCGT
GCTGGGCAGGCGCCAGCCCCCAGCCTCCTGCAGAATCCCCGCTCCTGGTTCCTGCTCTGCATCTTCCTGA
CGTGTCAGCTATTCATTAACTATATCCTCAAATAA

Translation (874 aa):
MKEEAFLRRRFSLCPPASTPQKTDPRKVPRNLLLGCENELGPITPGRDMESNGPSQPRDEEPQTPGSATK
VPLAEYRLCNGSDKECTSPTTRVSKKDALKAQKENYRQEKKRATKQLFSALTDPSVVIMADSLKIRGTLK
SWTKLWCVLKPGVLLIYKTPKVGQWVGTVLLHCCELIERPSKKDGFCFKLFHPLDQSVWAVKGPKGESVG
SITQPLPSSYLIFRAASESDGRCWLDALELALRCSSLLRLSTCKQGRDGEQGSSPDASPSSLYGLPTSAT
IPDQDLFPLNGSALENDAFSDKSERENAEDSDAETQDHSRKTNESGSDLLDSPGGPWRGTTYVEQVQEEL
GELDETSQVETVSEENKSLMWVLLRQLRPGMDLSRVVLPTFVLEPRSFLGKLSDYYYHGDLLSRAAAEDD
PYCRMKLVLRWYLSGFYKKPKGIKKPYNPILGETFRCRWLHPQTNSHTFYIAEQVSHHPPVSAFYVSNRK
DGFCMSGSITAKSKFYGNSLSALLDGKAKLTFLNRKEEYTLTMPYAHCRGILYGTMTMELGGKVNIECEK
NNLQAELDFKLKPFFGSSANINQISGKIMSGEEVLARLTGHWDRDVFIKEESSGGTELFWTPSEEVRRQR
LKRHTVLLEEQSELESERLWQHVTRAIREGDQHKATQEKSVLEEAQRQRAREHQQSLTPWKPQLFLLDPL
TQEWRYRYEDLSPWDPLKDIAQYEQDGILHTLQRETMSGQTTFLGSPDSRHKRPSSDRRLRKASDQPSGH
SQVTESSGSTPESCPDLSDEDFVPGGESPCPRCRREVHRLKMLQEAVLSIQEAQQELHRHLSTMLSSTVR
AGQAPAPSLLQNPRSWFLLCIFLTCQLFINYILK


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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