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Report for CCDS21868.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
21868.1 Public Mus musculus 7 Prr14 23 108 98 CCDS HistoryNCBI Gene:233895Re-query CCDS DB by CCDS ID:21868.1Re-query CCDS DB by GeneID:233895See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 21868.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000033095.9 ENSMUSP00000033095.8 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000033095.9Link to Ensembl Protein Viewer:ENSMUSP00000033095.8Re-query CCDS DB by Nucleotide ID:ENSMUST00000033095Re-query CCDS DB by Protein ID:ENSMUSP00000033095
Original member Current member EBI ENSMUST00000106292.7 ENSMUSP00000101899.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000106292.7Link to Ensembl Protein Viewer:ENSMUSP00000101899.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000106292Re-query CCDS DB by Protein ID:ENSMUSP00000101899
Original member NCBI NM_145589.2 NP_663564.2 Updated not alive Link to Nucleotide Sequence:NM_145589.2Link to Protein Sequence:NP_663564.2Re-query CCDS DB by Nucleotide ID:NM_145589Re-query CCDS DB by Protein ID:NP_663564
Current member NCBI NM_145589.3 NP_663564.2 Accepted alive Link to Nucleotide Sequence:NM_145589.3Link to Protein Sequence:NP_663564.2Re-query CCDS DB by Nucleotide ID:NM_145589Re-query CCDS DB by Protein ID:NP_663564Link to BLAST:NP_663564.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_663564.2 612 Q7TPN9 612 100% 0 0

Chromosomal Locations for CCDS 21868.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 7 (NC_000073.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 127471955 127471977 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127472098 127472266 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127473595 127473716 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127473797 127473986 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127474379 127474422 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127474514 127474719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127475052 127475625 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127475757 127475826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127475907 127475998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127476222 127476293 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 127476384 127476660 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1839 nt):
ATGGACTTGCCTGGGAACTCCAGCCCTTTTACACAGCCAAGCCTGTGCCGTCAGCCTCTATCTCGAGCAT
CATGGGAAGCCAGGAGCCCGAAAAGACCGAGGCTGCAGCCTTTGGGGACCCCTTCATCCCTAGAAAAGGC
CTCTCGGAGGGTCCTTGCCGTGGTGTTGGAAGATGTCATGACTACAAACAGGGTCCCCCTGACACACAAA
GAGGACACTCCCAGCCCACTGACTCACAACCATCATCAGGATCCTGTCTGCACACAGTCACCTGCTTTAC
CATCCCAACAGGTCAAGTGGTCCATGCAAGCCAGGCCTCCTGACCCACTGCATTTGTGCAGAGAACCCTT
GACTCGAGCCCGCCAGTCCTCGCCTGCCTTGAGAATGAGATCAAGGGCAGCATCTGGCCCAGAGGAGAGC
CCCTCAAAAAAGACAGACCAGGTCCCACAGCCCACCCTAGTGGTGGTACTGGAAGACATTGCCAGTGGCA
GACAACCAGCAGAGGGTTTTGATGAAGATCAGCCCAACCTCATTGTCCCAGCACAAAGCACCTTCAGAAG
CCTGAAGGGCCCGGGGAAGCACTGCCACAGAAGGGGTCTGGACTTGGAAGCACGCCCAACTCTTACTTTG
TCCCTTCACCCGAGAGCTGAGCCTGTGACAAAAGCTGGTCAGCCAATGCCTACACCCAGTGACCTAGAAC
CCCCATTCCAACTGTCTACTCTACCTGCAGATCCTCCAGAGAGTCCAGTACCAGATCCTGCTCTGGAGAC
CCCGGTGATTCCAACATCGTCAAGCCTTTTACGACCCCGTCTCAGTCCCTGGGGCTTGGCCCCTCTCTTC
CGTTCCGTCCGATCAAAGCTTGAAAGCTTTGCTGATATCTTCTTCACACCTAACAAAACACCACAGCCTC
CACCCCCTTCACCTCCCATGAAATTAGAATTGAAGATTGCCATCTCGGAGGCTGAGCAGTCCAGGGCTAC
TGAGAAAATTACATCTGTCAGCCCCAGGCCCCCTATCCGCCAGTGGCGGACTCAGTGCAATTCCCTAGCA
CCTGTCTCTAAGTCATCTCTGGGACGAAGCTACTCCTGCCCTGATCTAGGGCCCCCTGACCCAGGTAGCT
GGCCTCCTGTCCCATCCCAGCCAAGCCAGTCCAGGCCCCGGAGACATACTGTGGGTTGTGGGGAGATGGC
CCGGACCCCACCACCTCCTCGACCCTGTCTCCGGAAAGAGGTCTTCCCTCTTGGAGGAGTGGGAGTCTCT
CCTTCTCTCACTACATCTTGCTCAGCCAATGCCCCTGCTTCCTTCTTCTGCGAGCCGGCAGAACCCAGGT
TGGGTTCAACGAAGGGGAAGGAGTTAAGAGCCTCAAAAGACAAGGTGTTTTCTGATCCAGAGACCAAGAC
CATGGGGAAGGTTTCTAGATTCAGAATACGGAGGACACCTGTCCGTCTCCAACCAAACCTTACACCAATG
GGGCTGCCTCGACCAATCAGGTTGAATAAGAAGGAGTTCACTTTGGAAGAAATTTATACAAATAAGAACT
ACCAATCACCCACAACCAGAAGGACCTTTGAGACCATCTTTGAGGAACCACGGGAGCGCAATGGAACTCT
GATTTTTACCAGCTCTAGGAAGCTCCGAAGGGCAGTAGAATTTCGGGACAGTAGCCTTCCTCGATCCCGG
CGACCATCACGAGGGGTCCGCACCGCAGCAAGCAGAACCCTTACTCCCAACCTGGCACCCAGCCAGGATG
TGGGGTCTCTACTGCAAGAAAGGCTGAGGGAGCTAGATGCCTTGCTCCTGGAGGAGGAGACAGATAAGGA
ACACCCTTGTCACCTCTAG

Translation (612 aa):
MDLPGNSSPFTQPSLCRQPLSRASWEARSPKRPRLQPLGTPSSLEKASRRVLAVVLEDVMTTNRVPLTHK
EDTPSPLTHNHHQDPVCTQSPALPSQQVKWSMQARPPDPLHLCREPLTRARQSSPALRMRSRAASGPEES
PSKKTDQVPQPTLVVVLEDIASGRQPAEGFDEDQPNLIVPAQSTFRSLKGPGKHCHRRGLDLEARPTLTL
SLHPRAEPVTKAGQPMPTPSDLEPPFQLSTLPADPPESPVPDPALETPVIPTSSSLLRPRLSPWGLAPLF
RSVRSKLESFADIFFTPNKTPQPPPPSPPMKLELKIAISEAEQSRATEKITSVSPRPPIRQWRTQCNSLA
PVSKSSLGRSYSCPDLGPPDPGSWPPVPSQPSQSRPRRHTVGCGEMARTPPPPRPCLRKEVFPLGGVGVS
PSLTTSCSANAPASFFCEPAEPRLGSTKGKELRASKDKVFSDPETKTMGKVSRFRIRRTPVRLQPNLTPM
GLPRPIRLNKKEFTLEEIYTNKNYQSPTTRRTFETIFEEPRERNGTLIFTSSRKLRRAVEFRDSSLPRSR
RPSRGVRTAASRTLTPNLAPSQDVGSLLQERLRELDALLLEEETDKEHPCHL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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