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Report for CCDS23742.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
23742.1 Public Mus musculus 10 Taar7d 23 108 98 CCDS HistoryNCBI Gene:435206Re-query CCDS DB by CCDS ID:23742.1Re-query CCDS DB by GeneID:435206See the combined annotation on chromosome 10 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 23742.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000092657.1 ENSMUSP00000090327.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000092657.1Link to Ensembl Protein Viewer:ENSMUSP00000090327.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000092657Re-query CCDS DB by Protein ID:ENSMUSP00000090327
Original member Current member NCBI NM_001010838.1 NP_001010838.1 Accepted alive Link to Nucleotide Sequence:NM_001010838.1Link to Protein Sequence:NP_001010838.1Re-query CCDS DB by Nucleotide ID:NM_001010838Re-query CCDS DB by Protein ID:NP_001010838Link to BLAST:NP_001010838.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001010838.1 358 Q5QD10 358 100% 0 0

Chromosomal Locations for CCDS 23742.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 10 (NC_000076.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10See the combined annotation on chromosome 10 in Sequence Viewer

Chromosome Start Stop Links
10 24027222 24028298 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 10Link to Ensembl Genome Browser on chromosome 10

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1077 nt):
ATGGCTACAGGTGATGACAGTTTTCCCTGGGACCAAGACAGCATCCTGAGCAGAGATCTGTTCTCTGCCA
CATCTACAGAGCTGTGCTATGAGAACCTGAACAGATCCTGTGTCAGGAGCCCATACTCTCCAGGCCCTCG
CCTCATCCTCTATGCAGTCTTTGGCTTTGGGGCTGTGCTGGCTGTGTGTGGAAACCTCCTGGTGATGACA
TCAATTCTTCATTTCAGGCAGCTGCACTCTCCTGCCAACTTCCTGGTGGCATCCCTGGCCTGTGCTGACT
TCTTGGTAGGGGTGATGGTGATGCCTTTTAGCATGGTGAGGTCTGTGGAGGGCTGCTGGTACTTTGGGGA
GAGTTACTGTAAATTCCATTCTTGCTTTGAAGGGTCATTCTGCTATTCCTCTCTCTTCCACTTGTGCTTC
ATCTCTGTTGATAGATACATTGCAGTCAGTGATCCTCTGACCTACCCCACCAGGTTTACTGCATCTGTTT
CTGGCAAGTGCATCACCTTCTCCTGGCTCCTGTCCATCATCTACAGCTTTTCCCTCCTTTACACAGGAGC
CAATGATGCTGGGCTGGAGGATCTAGTGAGTGCCCTCACCTGTGTGGGTGGGTGTCAAATCGCAGTGAAT
CAAACCTGGGTCTTCATCAATTTCCTATTATTTCTTATCCCCACCCTTGTGATGATAACTGTCTACTCTA
AGATTTTCCTCATTGCTAAACAGCAGGCTCAGAACATTGAGAAGATGAGCAAGCAGACTGCCAGAGCATC
AGAAAGCTACAAGGACAGGGTGACCAAGAGGGAAAGGAAAGCAGCCAAAACCCTGGGCATCGCAGTGGCT
GCCTTCCTCCTTTCATGGCTGCCATACTTCATTGACTCCATCATTGATGCCTTCCTTGGGTTCATCACGC
CCACGTATGTGTATGAAATCCTAGTTTGGATCGTTTACTATAACTCAGCCATGAACCCTTTGATTTATGC
TTTCTTTTATTCTTGGTTTCGAAAAGCCATCAAACTCATTGTCTCTGGCAAAATCTTGAGGGAGAATTCC
TCAACCACCAACCTGTTTCCTGAATAG

Translation (358 aa):
MATGDDSFPWDQDSILSRDLFSATSTELCYENLNRSCVRSPYSPGPRLILYAVFGFGAVLAVCGNLLVMT
SILHFRQLHSPANFLVASLACADFLVGVMVMPFSMVRSVEGCWYFGESYCKFHSCFEGSFCYSSLFHLCF
ISVDRYIAVSDPLTYPTRFTASVSGKCITFSWLLSIIYSFSLLYTGANDAGLEDLVSALTCVGGCQIAVN
QTWVFINFLLFLIPTLVMITVYSKIFLIAKQQAQNIEKMSKQTARASESYKDRVTKRERKAAKTLGIAVA
AFLLSWLPYFIDSIIDAFLGFITPTYVYEILVWIVYYNSAMNPLIYAFFYSWFRKAIKLIVSGKILRENS
STTNLFPE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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