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Report for CCDS26145.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26145.1 Public Mus musculus 12 Serpina12 23 108 98 CCDS HistoryNCBI Gene:68054Re-query CCDS DB by CCDS ID:26145.1Re-query CCDS DB by GeneID:68054See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 26145.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000043915.3 ENSMUSP00000045572.3 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000043915.3Link to Ensembl Protein Viewer:ENSMUSP00000045572.3Re-query CCDS DB by Nucleotide ID:ENSMUST00000043915Re-query CCDS DB by Protein ID:ENSMUSP00000045572
Original member Current member NCBI NM_026535.2 NP_080811.1 Accepted alive Link to Nucleotide Sequence:NM_026535.2Link to Protein Sequence:NP_080811.1Re-query CCDS DB by Nucleotide ID:NM_026535Re-query CCDS DB by Protein ID:NP_080811Link to BLAST:NP_080811.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_080811.1 413 Q7TMF5 413 100% 0 0

Chromosomal Locations for CCDS 26145.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 12 (NC_000078.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 104031019 104031207 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104032425 104032572 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104035551 104035821 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 104037738 104038371 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1242 nt):
ATGACTCGCATGCTGGACCTGGGCCTGTTTCTGGCAGGCCTCCTCACTGTGAAAGGTCTCCTGCAGGACA
GAGATGCTCCAGATATGTATGATTCTCCAGTCAGGGTCCAAGAGTGGAGGGGCAAGAAGGATGCCCGGCA
GCTTGCTCGACACAACATGGAATTTGGCTTCAAGCTACTGCAGAGGCTGGCCAGCAATAGCCCTCAGGGA
AACATCTTCCTATCCCCACTGAGCATCTCCACTGCCTTCTCCATGCTGTCTCTCGGGGCCCAGAACTCCA
CACTGGAGGAAATCCGGGAGGGCTTCAACTTCAAAGAGATGTCAAACTGGGACGTCCATGCGGCTTTCCA
CTACCTTCTCCACAAGCTCAACCAGGAGACGGAGGACACAAAGATGAACTTAGGCAATGCTTTATTTATG
GATCAGAAGCTGAGGCCCCAACAGAGGTTCCTGAACCTGGCTAAGAATGTGTATGATGCGGACATGGTGC
TCACTAACTTCCAGGACTTAGAAAACACTCAGAAGGATATCAACAGATACATCAGTCAGAAAACCCACAG
CAGAATCAAAAACATGGTAAAAAGCATAGACCCAGGCACCGTGATGATTCTCACAAATTATATTTACTTT
CGAGGCAGGTGGCAGTATGAATTCGACCCAAAACAGACCAAGGAGGAGGAGTTCTTCATAGAGAAAGGCA
AGACCGTGAAGGTACCCATGATGTTCCAAAGGGGCTTGTACGACATGGCCTATGACAGCCAGCTCTCCTG
CACCATCTTGGAAATCCCCTACCGGGGAAACATCACAGCCACATTTGTCCTTCCTGACAATGGCAAGCTG
AAGCTGCTGGAGCAGGGGTTGCAGGCAGACATCTTTGCCAAGTGGAAAAGCCTTCTCTCAAAAAGAGTGG
TGGATGTGTGGGTGCCCAAGCTCCGCATCTCGTCTACTTACAACATGAAGAAGGTTCTGTCCCGCCTGGG
CATCAGCAAAATCTTTGAGGAGAATGGTGACCTCACCCGGATCTCATCTCATCGAAGCCTGAAGGTGGGA
GAGGCTGTGCACAAGGCTGAACTGAAGATGGATGAGAAAGGCATGGAAGGGGCTGCAGGCTCTGGAGCCC
AGACATTGCCCATGGAGACCCCACGACATATGAAGCTAGACAGACCCTTCCTCATGATGATCTATGAGAA
TTTCATGCCTTCCATGGTCTTCTTGGCAAGGATTTATGACCCTAGTGGGTAA

Translation (413 aa):
MTRMLDLGLFLAGLLTVKGLLQDRDAPDMYDSPVRVQEWRGKKDARQLARHNMEFGFKLLQRLASNSPQG
NIFLSPLSISTAFSMLSLGAQNSTLEEIREGFNFKEMSNWDVHAAFHYLLHKLNQETEDTKMNLGNALFM
DQKLRPQQRFLNLAKNVYDADMVLTNFQDLENTQKDINRYISQKTHSRIKNMVKSIDPGTVMILTNYIYF
RGRWQYEFDPKQTKEEEFFIEKGKTVKVPMMFQRGLYDMAYDSQLSCTILEIPYRGNITATFVLPDNGKL
KLLEQGLQADIFAKWKSLLSKRVVDVWVPKLRISSTYNMKKVLSRLGISKIFEENGDLTRISSHRSLKVG
EAVHKAELKMDEKGMEGAAGSGAQTLPMETPRHMKLDRPFLMMIYENFMPSMVFLARIYDPSG


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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