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Report for CCDS22773.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
22773.1 Public Mus musculus 8 2310022B05Rik 23 108 98 CCDS HistoryNCBI Gene:69551Re-query CCDS DB by CCDS ID:22773.1Re-query CCDS DB by GeneID:69551See the combined annotation on chromosome 8 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 22773.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000034464.7 ENSMUSP00000034464.6 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000034464.7Link to Ensembl Protein Viewer:ENSMUSP00000034464.6Re-query CCDS DB by Nucleotide ID:ENSMUST00000034464Re-query CCDS DB by Protein ID:ENSMUSP00000034464
Original member Current member NCBI NM_175149.4 NP_780358.3 Accepted alive Link to Nucleotide Sequence:NM_175149.4Link to Protein Sequence:NP_780358.3Re-query CCDS DB by Nucleotide ID:NM_175149Re-query CCDS DB by Protein ID:NP_780358Link to BLAST:NP_780358.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780358.3 322 Q8C3W1 322 100% 0 0

Chromosomal Locations for CCDS 22773.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 8 (NC_000074.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8See the combined annotation on chromosome 8 in Sequence Viewer

Chromosome Start Stop Links
8 124637908 124637964 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124639091 124639615 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124651371 124651421 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8
8 124662848 124663183 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 8Link to Ensembl Genome Browser on chromosome 8

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (969 nt):
ATGGCGTCGATGGCGGCGGCGATCGCGGCCTCGCGTTCGGCCGTCATGAGCGGGAACCGGCCGCTGGACG
ACCGGGAGCGGAAGCGCTTCACCTACTTCTCATCGCTGAGCCCCATGGCCAGGAAGATCATGCAGGACAA
GGAGAAGATCCGGGAGAAGTACGGGCCCGAGTGGGCGCGGCTGCCGCCCGCGCAGCAGGACGAAATCATC
GACCGCTGCCTGGTGGGGCCTCGCGCCCCGGCGGCCGCCGCCGATGCGGGGGACGTGCGGGACCCGGCGC
GCTTCCCTGGCCTGCGCGGGCCCACGGGCCAGAAGCTGGTGCGCTTCGGCGACGAGGACATAACTTGGCA
AGATGAACACTCGGCCCCATTCTCCTGGGAGACGAGGAGTCAGATGGAATTCAGCATCTCCTCCTTATCC
ATCCAGGAGCCCAGCGCTGCCACTGTGACCAGTGATGCCAGGTCCCTGGCCAAGGCTCCTCAGGGCACAC
AGGGTTCCAAACCTGCCCAGAGCAGCAGATCCTCTAGCCTGGATGCCCTGGGACCGGCTCGGAAAGAGGA
AGAAGCACCCTTCTGGAAGATCAATGCCGAGCGCTCTCGGGAGGGGCCTGAGGCTGAGTTCCAGTCCCTG
ACACCCAGCCAGATCAAGTCCATGGAGAAGGGGGAAAAGGTTCTGCCAGCTTGCTACCGCCAAGAGCCCA
CCACGAAAGACAGGGAGGCCAAACCTGTGCCACAGGAACAGCAGACCCTCCCCAGTGTGAGCGCAGAGCA
AGAGGTGCCCCAGCCGGTGCAAGCCCCTGCCAGCTTGCTGCCCAAGGCTACCCCCACGGAGTCCCCAGAG
AAGCCACCGCCTCCTGCCGTCCAGCGGGACGAAGATGATGATGCTCTGTTCTCAGAGCCTGCACTTGCGC
AGATCAGCTCCAGTAATGTGCTCTTGAAGACAGGCTTTGATTTTCTGGACAACTGGTAA

Translation (322 aa):
MASMAAAIAASRSAVMSGNRPLDDRERKRFTYFSSLSPMARKIMQDKEKIREKYGPEWARLPPAQQDEII
DRCLVGPRAPAAAADAGDVRDPARFPGLRGPTGQKLVRFGDEDITWQDEHSAPFSWETRSQMEFSISSLS
IQEPSAATVTSDARSLAKAPQGTQGSKPAQSSRSSSLDALGPARKEEEAPFWKINAERSREGPEAEFQSL
TPSQIKSMEKGEKVLPACYRQEPTTKDREAKPVPQEQQTLPSVSAEQEVPQPVQAPASLLPKATPTESPE
KPPPPAVQRDEDDDALFSEPALAQISSSNVLLKTGFDFLDNW


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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