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Report for CCDS37544.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
37544.1 Public Mus musculus 17 Tff3 23 108 98 CCDS HistoryNCBI Gene:21786Re-query CCDS DB by CCDS ID:37544.1Re-query CCDS DB by GeneID:21786See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 37544.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000024827.4 ENSMUSP00000024827.4 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000024827.4Link to Ensembl Protein Viewer:ENSMUSP00000024827.4Re-query CCDS DB by Nucleotide ID:ENSMUST00000024827Re-query CCDS DB by Protein ID:ENSMUSP00000024827
Original member Current member NCBI NM_011575.2 NP_035705.1 Accepted alive Link to Nucleotide Sequence:NM_011575.2Link to Protein Sequence:NP_035705.1Re-query CCDS DB by Nucleotide ID:NM_011575Re-query CCDS DB by Protein ID:NP_035705Link to BLAST:NP_035705.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_035705.1 81 Q62395 81 100% 0 0

Chromosomal Locations for CCDS 37544.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 17 (NC_000083.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 31125483 31125496 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31127365 31127511 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 31129492 31129576 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (246 nt):
ATGGAGACCAGAGCCCTCTGGCTAATGCTGTTGGTGGTCCTGGTTGCTGGGTCCTCTGGGATAGCTGCAG
ATTACGTTGGCCTGTCTCCAAGCCAATGTATGGTGCCGGCAAATGTCAGAGTGGACTGTGGCTACCCCTC
TGTCACATCGGAGCAGTGTAACAACCGTGGCTGCTGCTTTGACTCCAGTATCCCAAATGTGCCCTGGTGC
TTCAAACCTCTGCAGGAGACAGAATGCACATTTTGA

Translation (81 aa):
METRALWLMLLVVLVAGSSGIAADYVGLSPSQCMVPANVRVDCGYPSVTSEQCNNRGCCFDSSIPNVPWC
FKPLQETECTF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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