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Report for CCDS36801.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
36801.1 Public Mus musculus 14 Acox2 23 108 98 CCDS HistoryNCBI Gene:93732Re-query CCDS DB by CCDS ID:36801.1Re-query CCDS DB by GeneID:93732See the combined annotation on chromosome 14 in Sequence Viewer

Public since: CCDS release 4, NCBI annotation release 37.1, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 36801.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000022271.13 ENSMUSP00000022271.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000022271.13Link to Ensembl Protein Viewer:ENSMUSP00000022271.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000022271Re-query CCDS DB by Protein ID:ENSMUSP00000022271
Original member Current member EBI ENSMUST00000164598.7 ENSMUSP00000126464.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000164598.7Link to Ensembl Protein Viewer:ENSMUSP00000126464.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000164598Re-query CCDS DB by Protein ID:ENSMUSP00000126464
Original member Current member NCBI NM_001161667.1 NP_001155139.1 Accepted alive Link to Nucleotide Sequence:NM_001161667.1Link to Protein Sequence:NP_001155139.1Re-query CCDS DB by Nucleotide ID:NM_001161667Re-query CCDS DB by Protein ID:NP_001155139Link to BLAST:NP_001155139.1
Original member Current member NCBI NM_053115.2 NP_444345.2 Accepted alive Link to Nucleotide Sequence:NM_053115.2Link to Protein Sequence:NP_444345.2Re-query CCDS DB by Nucleotide ID:NM_053115Re-query CCDS DB by Protein ID:NP_444345Link to BLAST:NP_444345.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001155139.1 681 Q9QXD1 681 100% 0 0
NP_444345.2 681 Q9QXD1 681 100% 0 0

Chromosomal Locations for CCDS 36801.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 14 (NC_000080.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14See the combined annotation on chromosome 14 in Sequence Viewer

Chromosome Start Stop Links
14 8225766 8225828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8230159 8230291 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8241261 8241478 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8243723 8243828 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8246264 8246443 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8247935 8248125 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8249904 8250066 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8251504 8251676 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8252883 8252998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8253443 8253562 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8255194 8255301 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8255655 8255806 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8255995 8256157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14
14 8256702 8256861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 14Link to Ensembl Genome Browser on chromosome 14

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2046 nt):
ATGGGGAACCCAGGGGATCGAGTGTCACTGGGGGAGACCTGGAGCAGGGAAGTGCACCCTGACATAGACA
GTGAAAGGCACTCCCCGTCCTTCAGTGTGGAGCGGCTCACCAACATCCTTGATGGAGGCATCCCAAACAC
TGAGCTGCGGAGAAGAGTTGAAAGCCTCATCCAACGTGACCCAGTGTTTAATTTGAAGCATCTTTACTTC
ATGACCCGAGATGAGCTATATGAGGATGCAGTTCAAAAGAGATTCCATCTTGAGAAGCTAGCCTGGAGCC
TGGGCTGGTCAGAAGACGGTCCTGAACGCATTTATGCTGACAGAGTCCTTGCTGGATATAACAACTTAAA
CTTACATGGTATTGCCATGAATGCTATCAGAAGCCTGGGCTCAGATGAGCAGATTGCTAAATGGGGCCAA
CTCGGCAAAAACTTCCAAATCATCACAACATATGCCCAGACAGAGCTGGGACATGGGACATACCTGCAGG
GCCTGGAGACCGAAGCAACCTATGATGCAACCACCCAGGAGTTTGTGATACACAGCCCTACAATGACTTC
CATCAAGTGGTGGCCTGGGGACTTGGGACGGACAGTCACCCATGCTGTGGTCCTAGCCCATTTGATCTGC
TTAGGAGCCCGGCATGGCATGCATGCCTTCATTGTGCCCATCCGGAGCCTAGAGGACCACACCCCACTGC
CAGGAATAACAGTTGGGGACATAGGCCCCAAGATGGGCTTCGAAAACATAGACAATGGCTTCCTGCGACT
GAACCACGTGAGGGTTCCCAGAGAGAACATGCTCAGTCGCTTTGCAGAGGTCTTGCCAGATGGCACCTAC
CAGAGGCTTGGGACACCACAGAGCAATTATCTTGGCATGTTGGTGACACGGGTGCAGCTGCTGTATAAAG
GATTCCTACCCACCCTCCAGAAGGCTTGCACCATTGCTGTGCGCTACGCAGTAATCCGCCACCAGTCTCG
TCTTCGGCCTAGTGACCCAGAGGCAAAAATCCTGGAATACCAGACACAGCAGCAGAAACTCCTGCCTCAG
CTTGCTGTGAGCTATGCCTTGCATTTCATGACCACCAGCCTCTTACAATTCTTCCACAGCTCCTACAGTG
ATATTCTGAAGAGAGACTTCAGCCTCCTGCCTGAGCTCCATGCACTGAGCACTGGCATGAAGGCCATGTC
TTCAGACTTCTGTGCCCAGGGAACAGAGATCTGCCGCAGGGCCTGCGGGGGTCATGGCTACTCAAAGCTG
AGCGGCCTACCGACACTGGTCACTCAAGCGATAGCCTCTTGCACGTATGAGGGTGAGAATACGGTGCTCT
ACCTGCAAGTGGCCAGGTTTCTGATGAAGAGCTACCTGCAGGCTCAAGTGTCCCCAGGATCCATACCACA
GAAGCCTCTCCCTCAGTCCGTCATGTATCTCGCCACACCAAGACCAGCCAGGTGCCCAGCCCAGACAGCA
GCTGACTTCCGCTGCCCAGAAGTCTATACCACAGCCTGGGCATATGTGTCTGCCAGGCTCATAAGAGATG
CAACACAGCATACACAGACCCTCATGAGATCCGGGGTTGACCAGTACGATGCTTGGAACCAGACTTCTGT
CATACACCTTCAGGCTGCTAAGGCTCACTGCTACTTCCTCACTGTGAGGAATTTCAAGGAAGCTGTGGAG
AAACTAGACAACGAACCAGAGATTCAGCGTGTGCTTCAGAACCTCTGTGACCTCTATGCCTTAAACGGTA
TTCTGACTAACTCAGGGGACTTTCTGCATGATGGCTTCCTGTCTGGGGCCCAAGTGGACATGGCAAGAAC
AGCCTTCCTAGACCTGCTTCCCTTGATCCGGAAGGACGCCATCTTGTTAACAGATGCTTTTGACTTCTCG
GACCATTGTTTAAACTCTGCACTTGGCTGTTATGACGGACACGTCTACCAACGCCTGTTTGAGTGGGCTC
AGAAGTCCCCAGCCAATACTCAGGAGAACCCTGCCTATAAGAAGTATATTAGACCACTGATGCAAAGCTG
GAAACCCAAGCTGTGA

Translation (681 aa):
MGNPGDRVSLGETWSREVHPDIDSERHSPSFSVERLTNILDGGIPNTELRRRVESLIQRDPVFNLKHLYF
MTRDELYEDAVQKRFHLEKLAWSLGWSEDGPERIYADRVLAGYNNLNLHGIAMNAIRSLGSDEQIAKWGQ
LGKNFQIITTYAQTELGHGTYLQGLETEATYDATTQEFVIHSPTMTSIKWWPGDLGRTVTHAVVLAHLIC
LGARHGMHAFIVPIRSLEDHTPLPGITVGDIGPKMGFENIDNGFLRLNHVRVPRENMLSRFAEVLPDGTY
QRLGTPQSNYLGMLVTRVQLLYKGFLPTLQKACTIAVRYAVIRHQSRLRPSDPEAKILEYQTQQQKLLPQ
LAVSYALHFMTTSLLQFFHSSYSDILKRDFSLLPELHALSTGMKAMSSDFCAQGTEICRRACGGHGYSKL
SGLPTLVTQAIASCTYEGENTVLYLQVARFLMKSYLQAQVSPGSIPQKPLPQSVMYLATPRPARCPAQTA
ADFRCPEVYTTAWAYVSARLIRDATQHTQTLMRSGVDQYDAWNQTSVIHLQAAKAHCYFLTVRNFKEAVE
KLDNEPEIQRVLQNLCDLYALNGILTNSGDFLHDGFLSGAQVDMARTAFLDLLPLIRKDAILLTDAFDFS
DHCLNSALGCYDGHVYQRLFEWAQKSPANTQENPAYKKYIRPLMQSWKPKL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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