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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS89866.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
89866.1 |
Public |
Mus musculus |
4 |
Chd5 |
23 |
108 |
98 |
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Public since: CCDS release 23, NCBI annotation release 108, Ensembl annotation release 98
Review status: Reviewed (by RefSeq and Havana)
Attributes |
Inferred exon combination |
Sequence IDs included in CCDS 89866.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000005175.4 |
ENSMUSP00000005175.4 |
Accepted |
alive |
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NCBI |
NM_001369243.1 |
NP_001356172.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_001356172.1 |
1946 |
A2A8L1 |
1946 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 89866.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (5841 nt): ATGCGGGGCCCGCTGGGCACCGAGGAGGAGCTGCCGCGGCTGTTCGCGGAGGAGATGGAGAACGAGGAGG AGATGTCAGAAGAAGAAGACGGTGGCCTTGAAGGCTTTGAGGACTTCTTCCCTGCAGAGCCCGTGAGTCT TCCCAAGAAGAAGCCGAAGAAGCTGAAAGAGAGCAAGTCCTCCAAAGGTAAAAGGAAGAAGAAAGAGGGG AGCAATGACGAGATGTCAGACAACGAGGAGGACCTGGAAGAGAAGTCAGAGAGCGAAGGTAGCGACTACT CCCCCACCAAGAAGAAGAAGAAGAAACTGAAGGAGAAGAAGGAGAAGAAGGAGAAGAAGGAGAAGCGGAA AAAGAGGGGTGAGGATGAAGATGATAACGACGACGGAGGCTTGAAGGAGCCCAAGTCCTCGGGACAACTC ATGGCGGAGTGGGGGCTGGACGACGTGGACTACCTGTTTTCTGAGGATGACTACCACACACTGACCAACT ACAAAGCCTTCAGCCAGTTCCTCAGGCCCCTTATTGCCAAGAAGAATCCGAAGATCCCCATGTCCAAAAT GATGACTGTCCTGGGGGCCAAGTGGCGAGAATTCAGCGCCAACAACCCGTTTAAGGGTAGCTCGGCAGCA GCAGCTGCGGCGGCCGTGGCCGCGGCCGTGGAGACAGTGACCATTGCTCCTCCCTTGGCCATCAGTCCCC AGCAAGTGCCCCAGACTCTGCCCATACGAAAGGCCAAGACCAAAGAGGGCAAGGGGCCCGGAGTGAGGAA GAAGAACAAAGGCGCCAAAGATTCCAAGAAAAAGGGCAGGGGCAAGAGAGTGGCAGGGCTCAAGTTCCGC TTCGGAGGGATCAGCAAGAGGAAGAAGGGTTCCTCGAGCGAGGAGGATGAACGGGAGGACTCAGACTTGG ACAATGCCAGCATCCACAGCTCTTCTGTGCGTTCTGAGTGCTCTGCAGCTCTGGGCAAGAAGAACAAGAG GAGGCGCAAGAAGAAGAGGATTGACGATGGTGACGGCTATGAGACAGACCACCAGGACTACTGTGAGGTG TGCCAGCAGGGAGGCGAGATCATTCTCTGTGACACCTGCCCGAGGGCATATCACCTAGTCTGCCTGGACC CGGAGCTGGAGAAGGCTCCAGAGGGCAAGTGGAGCTGCCCACACTGTGAGAAGGAGGGGATCCAGTGGGA GCCGAAGGATGATGATGAAGAGGAGGAGGAGGGCGGCTGCGAGGAAGAGGAGGATGACCACATGGAGTTC TGCCGCGTGTGCAAGGACGGTGGCGAGCTCCTGTGCTGTGATGCCTGTCCCTCCTCCTACCACTTGCACT GCCTCAACCCGCCGCTGCCGGAGATACCGAACGGTGAATGGCTCTGCCCGCGCTGTACATGTCCCCCGCT GAAGGGCAAAGTTCAGCGGATCCTACACTGGAGGTGGACAGAACCCCCGGCTCCCTTTGTGGTGGGGCTG CCAGGACCAGAGGTGGAGCCAGGCATGCCCCCGCCCAGGCCTCTGGAGGGCATTCCTGAGAGAGAGTTCT TTGTCAAGTGGGCTGGTCTCTCCTACTGGCACTGCTCCTGGGTGAAGGAGCTACAGTTGGAGCTGTACCA CACCGTGATGTATCGCAACTACCAAAGAAAGAATGACATGGACGAACCGCCACCCTTTGATTACGGCTCT GGCGATGAGGATGGTAAGAGCGAGAAACGGAAGAACAAGGACCCTCTCTACGCCAAGATGGAGGAACGCT TCTACCGCTACGGCATCAAGCCCGAGTGGATGATGGTTCACCGCATCCTGAACCACAGCTTTGACAAGAA GGGGGACATACATTACCTGATCAAGTGGAAGGACCTGCCCTACGACCAGTGCACCTGGGAGATTGATGAG ATTGACATTCCCTACTACGACAACCTGAAGCAGGCCTACTGGGGCCACAGGGAGCTGATGCTGGGGGAAG ATGCCAGGCTGCCCAAGCGGCTGGTGAAGAAGGGCAAGAAGCTGAAGGACGATAAACAAGAGAAGCCACC CGATACGCCCATCGTGGACCCCACAGTCAAGTTCGACAAGCAGCCGTGGTACATCGACGCCACAGGAGGC ACGCTGCACCCTTACCAGCTGGAGGGCCTTAACTGGTTACGCTTCTCCTGGGCCCAGGGCACCGACACTA TCCTGGCTGACGAGATGGGTTTGGGGAAGACAGTACAGACCATTGTGTTTCTCTATTCTCTGTACAAGGA GGGCCACTCCAAGGGGCCTTACCTGGTCAGCGCGCCCCTGTCCACCATCATCAACTGGGAACGGGAGTTT GAGATGTGGGCGCCTGACTTTTACGTGGTCACCTACACGGGGGACAAGGAGAGCCGCTCTGTGATCCGTG AGAACGAGTTTTCCTTTGAGGACAACGCCATTCGCGGTGGCAAGAAAGTATTCCGCATGAAGAAGGAAGT GCAGATCAAATTCCACGTGCTGCTCACCTCTTATGAGCTCATCACCATTGACCAAGCCATCCTGGGCTCC ATCGAGTGGGCCTGCCTCGTGGTGGACGAGGCCCACCGGCTCAAGAACAACCAGTCCAAGTTCTTTAGGG TCTTGAATAGCTACAAGATCGACTACAAGCTGCTGCTGACAGGGACCCCCCTCCAGAACAACCTGGAGGA ACTGTTCCATCTCCTCAACTTCCTGACTCCAGAGAGGTTCAACAATCTGGAAGGCTTCTTGGAGGAGTTT GCTGACATATCCAAGGAAGATCAGATCAAAAAGCTGCATGATCTATTGGGGCCGCACATGCTTCGGCGGC TCAAGGCCGACGTGTTCAAGAACATGCCGGCTAAGACAGAGCTGATTGTCCGAGTGGAGCTGAGCCAGAT GCAGAAGAAGTACTACAAGTTCATCCTGACTCGGAACTTTGAGGCGCTCAATTCCAAGGGGGGTGGCAAC CAGGTGTCTCTACTCAATATCATGATGGATCTGAAGAAGTGCTGCAACCATCCGTACCTCTTCCCTGTGG CTGCTGTGGAAGCCCCTGTACTGCCCAATGGCTCCTACGATGGCAGCTCCCTGGTCAAGTCTTCGGGGAA GCTCATGCTATTGCAGAAGATGCTCAAGAAACTGCGGGATGAAGGGCACAGAGTGCTGATCTTCTCCCAG ATGACCAAGATGTTGGACCTCTTGGAGGACTTCCTGGAGTACGAGGGCTACAAGTATGAGCGGATCGACG GTGGCATCACTGGGGGCCTCCGGCAAGAGGCCATCGACAGATTCAACGCTCCTGGGGCCCAACAGTTCTG CTTCCTGCTCTCAACACGTGCCGGTGGCCTGGGCATCAACCTGGCCACAGCAGACACGGTCATCATCTAT GACTCGGACTGGAACCCTCACAATGACATCCAGGCCTTCAGCCGTGCTCACCGCATCGGGCAGAACAAGA AGGTCATGATCTATCGCTTCGTGACACGGGCCTCCGTGGAGGAGCGCATCACTCAGGTGGCCAAGCGTAA GATGATGCTCACACACCTGGTGGTGCGGCCTGGCTTGGGCTCCAAGTCGGGCTCCATGACCAAGCAGGAA CTGGATGATATCCTTAAGTTCGGGACAGAGGAGCTTTTCAAGGACGACGTGGAAGGCATGATGTCCCAGG GCCAGAGGCCTACCACACCCATCCCTGACATACAATCTACCAAGGGCGGATCTCTGACCGCCGGCGCAAA GAAAAAGCACGGCAGCACCCCGCCAGGCGATAACAAAGATGTAGAAGACAGCAGTGTGATCCATTATGAC GACGCAGCCATATCCAAGCTGCTGGATCGGAACCAGGACGCCACGGATGACACCGAGCTGCAGAACATGA ACGAGTACCTGAGCTCCTTCAAGGTGGCACAGTATGTGGTCCGCGAGGAAGATGGCGTGGAGGAGGTAGA GAGGGAGGTGATCAAGCAGGAGGAGAACGTGGACCCTGACTACTGGGAGAAGCTGCTGCGCCATCACTAT GAACAGCAGCAGGAGGACTTGGCCCGCAACCTGGGCAAGGGCAAGCGCATCCGCAAGCAGGTCAACTACA ATGATGCCTCCCAGGAGGACCAGGAGTGGCAGGATGAGCTCTCGGACAACCAGTCGGAGTATTCCATCGG TTCTGAGGATGAGGACGAGGACTTTGAGGAGCGACCAGAAGGGCAGAGTGGACGACGACAATCCAGGAGG CAGCTTAAGAGTGACAGGGACAAGCCCCTGCCTCCCCTTCTGGCTCGGGTTGGGGGCAACATTGAGGTTC TGGGCTTCAATGCCAGACAGAGGAAGGCTTTTTTGAACGCCATCATGCGCTGGGGCATGCCGCCTCAGGA TGCCTTCAACTCCCACTGGCTGGTGCGGGACCTTCGAGGGAAGAGTGAGAAGGAATTTAGGGCCTATGTA TCACTCTTCATGCGCCACCTGTGTGAGCCGGGCGCAGACGGCGCGGAGACCTTCGCAGACGGCGTGCCCC GGGAGGGCCTGTCTAGGCAGCACGTGCTCACGCGTATTGGGGTCATGTCGCTGGTTAGGAAGAAGGTGCA GGAGTTTGAGCATGTCAACGGCAAGTACAGCACCCCAGACCTGGTCCCCGAGGGGGCCGAGGGCAAGAAG CCGGGCGAGGTCATCTCCTCAGACCCCAACACACCTGTGCCTGCCAGCCCTGCACAGCTTCCACCGGCCC CACTGGGCCTGACAGACAAAATGGAAGCCCAGCTGGGCTACACAGATGAGAAGGAGTCAGGCATGCAGAA GCCAAAGAAGTCCCTGGAAATCCAGACCCTGCCAACTGCCCTGGACAGAGTAGAGGGTGAAGACAAACAT CAGAGCTCAGACAGCAAGGACAGGGCTCGGGAGGAGAGGACAGAAGAGGTGGAGAAGGCCCAGGGGTCTC CAGAGCAGCCACTGAAAGAGGAAGTGCTGCCGGACAAGGAGCCGATCCCAGACAAGCCGGAGCTGAGCTT GGGTCACAGCGGGGATTTCAGGCCAGATGACCCCAAGACTGAGGAGAAGGAGCCCGGGGAGACTCAGCAA AACGGCGACAGAGAGGAAGATGAGGAAGGCAAGAAAGAAGACAAAAATGGGAAATTCAAATTCATGTTCA ACATTGCAGATGGCGGTTTCACAGAGCTGCACACTCTGTGGCAGAACGAGGAGCGGGCGGCTGTGTCCTC GGGGAAAATCTACGAAATCTGGCACCGCCGTCACGACTACTGGCTGCTGGCAGGCATTGTGACGCATGGC TATGCCCGCTGGCAGGACATTCAGAATGACCCGAGATACATGATCCTAAATGAACCTTTCAAGTCTGAGA TCCACAAGGGCAACTACTTGGAGATGAAGAACAAGTTTTTGGCCCGTAGGTTCAAGCTGCTGGAGCAGGC GCTGGTGATTGAGGAGCAGCTCCGGAGGGCAGCGTACCTCAACATGACCCAGGATCCCAACCACCCAGCC ATGGCGCTCAATGCTCGCCTGGCAGAGGTGGAGTGCCTTGCCGAGAGCCACCAGCACCTATCCAAGGAGT CCCTCGCCGGAAACAAGCCTGCCAATGCTGTCCTGCACAAGGTCCTAAACCAGCTGGAGGAGCTGCTGAG TGACATGAAAGCAGATGTGACACGCTTGCCCTCCATGTTGTCACGCATCCCCCCGGTGGCCGCCCGTCTG CAGATGTCTGAACGCAGCATCTTGAGTCGCCTGACCAACCGAGCTGGTGACCCCACCATCCAGCAGACAT CTAGCCGTCGTCGTGACTTCCCCCTGTTTCAGCGCTCCTTTCCAGCTGAGCCAAGCCACCTGCCCAACCC CCGCGGGAGAGAAAAGCTACAGCCCTTTTAG
Translation (1946 aa): MRGPLGTEEELPRLFAEEMENEEEMSEEEDGGLEGFEDFFPAEPVSLPKKKPKKLKESKSSKGKRKKKEG SNDEMSDNEEDLEEKSESEGSDYSPTKKKKKKLKEKKEKKEKKEKRKKRGEDEDDNDDGGLKEPKSSGQL MAEWGLDDVDYLFSEDDYHTLTNYKAFSQFLRPLIAKKNPKIPMSKMMTVLGAKWREFSANNPFKGSSAA AAAAAVAAAVETVTIAPPLAISPQQVPQTLPIRKAKTKEGKGPGVRKKNKGAKDSKKKGRGKRVAGLKFR FGGISKRKKGSSSEEDEREDSDLDNASIHSSSVRSECSAALGKKNKRRRKKKRIDDGDGYETDHQDYCEV CQQGGEIILCDTCPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDEEEEEGGCEEEEDDHMEF CRVCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEPPAPFVVGL PGPEVEPGMPPPRPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYRNYQRKNDMDEPPPFDYGS GDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMVHRILNHSFDKKGDIHYLIKWKDLPYDQCTWEIDE IDIPYYDNLKQAYWGHRELMLGEDARLPKRLVKKGKKLKDDKQEKPPDTPIVDPTVKFDKQPWYIDATGG TLHPYQLEGLNWLRFSWAQGTDTILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREF EMWAPDFYVVTYTGDKESRSVIRENEFSFEDNAIRGGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGS IEWACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNNLEGFLEEF ADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYYKFILTRNFEALNSKGGGN QVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQ MTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIY DSDWNPHNDIQAFSRAHRIGQNKKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQE LDDILKFGTEELFKDDVEGMMSQGQRPTTPIPDIQSTKGGSLTAGAKKKHGSTPPGDNKDVEDSSVIHYD DAAISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREVIKQEENVDPDYWEKLLRHHY EQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDEDEDFEERPEGQSGRRQSRR QLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWGMPPQDAFNSHWLVRDLRGKSEKEFRAYV SLFMRHLCEPGADGAETFADGVPREGLSRQHVLTRIGVMSLVRKKVQEFEHVNGKYSTPDLVPEGAEGKK PGEVISSDPNTPVPASPAQLPPAPLGLTDKMEAQLGYTDEKESGMQKPKKSLEIQTLPTALDRVEGEDKH QSSDSKDRAREERTEEVEKAQGSPEQPLKEEVLPDKEPIPDKPELSLGHSGDFRPDDPKTEEKEPGETQQ NGDREEDEEGKKEDKNGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYEIWHRRHDYWLLAGIVTHG YARWQDIQNDPRYMILNEPFKSEIHKGNYLEMKNKFLARRFKLLEQALVIEEQLRRAAYLNMTQDPNHPA MALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKVLNQLEELLSDMKADVTRLPSMLSRIPPVAARL QMSERSILSRLTNRAGDPTIQQTSSRRRDFPLFQRSFPAEPSHLPNPRGREKLQPF
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