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Report for CCDS80968.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
80968.1 Public Mus musculus 9 Zfp653 23 108 98 CCDS HistoryNCBI Gene:319601Re-query CCDS DB by CCDS ID:80968.1Re-query CCDS DB by GeneID:319601See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 19, NCBI annotation release 105, Ensembl annotation release 81

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 80968.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000179605.8 ENSMUSP00000137064.1 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000179605.8Link to Ensembl Protein Viewer:ENSMUSP00000137064.1Re-query CCDS DB by Nucleotide ID:ENSMUST00000179605Re-query CCDS DB by Protein ID:ENSMUSP00000137064
Original member NCBI NM_001310759.1 NP_001297688.1 Updated not alive Link to Nucleotide Sequence:NM_001310759.1Link to Protein Sequence:NP_001297688.1Re-query CCDS DB by Nucleotide ID:NM_001310759Re-query CCDS DB by Protein ID:NP_001297688
Current member NCBI NM_001310759.2 NP_001297688.1 Accepted alive Link to Nucleotide Sequence:NM_001310759.2Link to Protein Sequence:NP_001297688.1Re-query CCDS DB by Nucleotide ID:NM_001310759Re-query CCDS DB by Protein ID:NP_001297688Link to BLAST:NP_001297688.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001297688.1 623 Q6YND2-2 623 100% 0 0

Chromosomal Locations for CCDS 80968.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 9 (NC_000075.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 22055716 22055893 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22055993 22056092 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22056414 22056528 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22057287 22057398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22057501 22057702 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22057804 22058415 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22065701 22065916 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22068148 22068191 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 22071049 22071341 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1872 nt):
ATGGCGGAGCGGGCTCCAGAGCCCGGGGCGGAGGCGGAGGCGGGCGCAGGCGGGGAGGCGGCGGCAGAGG
AAGGCGCGGCAGGCAGAAAGGCGCGGGGCCGGCCGCGGCTCACCGAGTCGGACCGGGCCCGGAGGCGGCT
CGAGTCCCGGAAGAAGTACGACGTGCGGCGCGTGTACCTGGGCGAGGCGCACGGCCCCTGGGTGGACCTG
AGACGCCGCAGCGGCTGGAGCGACGCCAAACTTGCCGCCTACCTCATTTCGCTGGAGCGTGGCCAGCGTA
GCGGTCGCCACGGGAAGCCTTGGGAGCAAGTCCCCAAAAAGCCAAAGCGGAAGAAAAGGCGGCGGCGCAA
TGTGAACTGCCTGAAGAACGTGGTCATCTGGTATGAGGACCACAAACACCGCTGCCCGTATGAGCCACAC
CTGGCTGAGCTTGACCCAACCTTTGGCCTTTACACAACGGCTGTGTGGCAGTGCGAGGCTGGACACCGCT
ACTTCCAGGATCTACACTCCCCGCTCAAGCCCCTCAGTGACTCAGAGCCTGACAGTGACAAAGTGGGCAG
TGGCCTGGTGGCTGGCAGCTCTGACTCATCCAGCTCGGGCTCCAGCTCTGACTCGGAGGAGCCTCCTGAG
ACCCAGCCAGCCAAAGCCTCAGCTGCTGCTGCAGCTCTCACCCCTGCCAGCCCCACGGGCAGCAGTGGGC
TTATCACTCAGGAAGGAGTTCATATCCCCTTTGACGTCCACCATGTGGAGAGCCTGGCTGAGCAGGGCAC
CCCTCTGTGCCAAAACCCTGCAGGCAGCGGGCCTGAGGCCCTGGAGACGGTGGTGTGTGTGCCAGTTCCC
ATGCAAGTGGGCACTGGCCCCGGCACCCTCTTTGAGAACATGCCCCAGGAGGCACTGGGTGAGGTGGTGG
CCAGCTGCCCGGTGTCAGGCATGGTGCCCGGCTCCCAGGTGATCATCATTGCTGGTCCTGGCTATGACGC
TCTCACAGCCGAGGGCATCCGCCTCAATGTAGCTGCTGGCGGCGGCACTCCCAGCAGCAGCCTGGGTGAG
GAGGTGCCCTGTGCCATGATGGAGGGTGTGGCAGCCTACACACAGACGGAGCCCGAGGGCACTCAGCACA
GCACCATGGATACCACCTCTATAGCCAGCATTGAGACCAAGAAAGACACCACCCCGTGTCACCCCGTAGA
GAAGGAGGACCTGTATATGCTCAAGGAGGAGAAAGAGGATTCAGTGGCCCCAGAGCTGGCAGAGCTGGCA
GCCACGGTGCCTGAGAATGCAGAGGCAGAGGCAGAAGTGGATGGAGAAGAATTGGACAGCAGTGAAATGT
CAGCCATCATCTATGAGATTCCCAAGGAGCCCGAGAAGAGACGGCGGAGCAAGCGGTCACGTGTGATGGA
TGCTGATGGCCTGCTGGAGATGTTCCACTGTCCATACGAGGGCTGCAGCCAGGTGTATGTGGCTCTCAGC
AGCTTCCAGAACCACGTCAACCTTGTGCACCGAAAAGGGAAGACCAAAGTGTGTCCTCACCCTGGCTGTG
GCAAGAAGTTTTATTTATCCAACCACCTGCGACGCCACATGATCATCCATTCAGGCGTCCGCGAGTTCAC
CTGTGAGACCTGCGGCAAGTCTTTCAAGAGGAAGAACCATCTGGAGGTGCACCGGCGCACGCACACTGGG
GAGACGCCCCTGCAGTGCGAGATATGCGGGTACCAGTGTCGGCAGCGTGCTTCGCTCAATTGGCACATGA
AGAAGCACACAGCCGAGGTGCAGTACAACTTCACGTGCGATCGCTGCGGGAAGCGCTTCGAGAAGCTGGA
CAGTGTCAAGTTCCACACGCTCAAAAGCCACCCGGACCACAAACCTACCTGA

Translation (623 aa):
MAERAPEPGAEAEAGAGGEAAAEEGAAGRKARGRPRLTESDRARRRLESRKKYDVRRVYLGEAHGPWVDL
RRRSGWSDAKLAAYLISLERGQRSGRHGKPWEQVPKKPKRKKRRRRNVNCLKNVVIWYEDHKHRCPYEPH
LAELDPTFGLYTTAVWQCEAGHRYFQDLHSPLKPLSDSEPDSDKVGSGLVAGSSDSSSSGSSSDSEEPPE
TQPAKASAAAAALTPASPTGSSGLITQEGVHIPFDVHHVESLAEQGTPLCQNPAGSGPEALETVVCVPVP
MQVGTGPGTLFENMPQEALGEVVASCPVSGMVPGSQVIIIAGPGYDALTAEGIRLNVAAGGGTPSSSLGE
EVPCAMMEGVAAYTQTEPEGTQHSTMDTTSIASIETKKDTTPCHPVEKEDLYMLKEEKEDSVAPELAELA
ATVPENAEAEAEVDGEELDSSEMSAIIYEIPKEPEKRRRSKRSRVMDADGLLEMFHCPYEGCSQVYVALS
SFQNHVNLVHRKGKTKVCPHPGCGKKFYLSNHLRRHMIIHSGVREFTCETCGKSFKRKNHLEVHRRTHTG
ETPLQCEICGYQCRQRASLNWHMKKHTAEVQYNFTCDRCGKRFEKLDSVKFHTLKSHPDHKPT


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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