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Report for CCDS26615.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
26615.1 Public Mus musculus 13 Zfp459 23 108 98 CCDS HistoryNCBI Gene:328274Re-query CCDS DB by CCDS ID:26615.1Re-query CCDS DB by GeneID:328274See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 26615.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000056470.9 ENSMUSP00000063027.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000056470.9Link to Ensembl Protein Viewer:ENSMUSP00000063027.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000056470Re-query CCDS DB by Protein ID:ENSMUSP00000063027
Original member Current member NCBI NM_177811.4 NP_808479.1 Accepted alive Link to Nucleotide Sequence:NM_177811.4Link to Protein Sequence:NP_808479.1Re-query CCDS DB by Nucleotide ID:NM_177811Re-query CCDS DB by Protein ID:NP_808479Link to BLAST:NP_808479.1

Chromosomal Locations for CCDS 26615.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '-' strand of Chromosome 13 (NC_000079.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 67408159 67408742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67413108 67413203 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 67413834 67413957 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (804 nt):
ATGCTGTCATTCAGGGATGTGGCCGTTGATTTCTCTGCAGAAGAGTGGGAATGCCTGGAGCCTGCTCAGT
GGCATCTGTACAGGGATGTGATGCTGGAGAATTACAGCCACCTTGTGTTCCTGGGGCTTGCTGACTCTAA
GCCACAGCTGGTGACATTTCTGGAGCAAAGACAAGGCTCTACTGGTGAAGAGAGACAAGCAGTAAAAGCA
GTGTTCCCAGGAATAACACCCAATGATCCTAACCATTACAGCAAGCCCACTAATTGTGAATCACTCCTTC
TTAAACGAAGAAGAATTAATACAGGGGAGAAACCCTACAAGTGTGAAGAATGTGGTAAGGCCCTTAGTTC
TCATAAAACACTTTCTATACACCAGAGACTTCATACTGGAGACAAACCCTACAAGTGTGAAGTGTGTCAT
AAGGCCTTCTGTGCTCCCTCATCACTTTTTATACACCAGAAAAATCATACTGATGAAAAAAACTTCAAGT
GTGAAGACTGTGGCAGAACATTTTACTATCTTTCAATGCTGAAGCAACATCAGAGAATTCATTCTGGGGA
GAAATGTTACAAGTGCAAAAATTGTGGATACGCTTCTTATGACCCTTCATTCCTTGAGCAGCATCAAAAA
ATTAATTGTAGGGAGAAATGCTACAAGTGTGAAGACTGTCACAAAGCCTTTCATCATCAGCCCTTAGGAT
ACACAAGAGAGTTCATACTGGAGAGAAACCTTTCAAATGTGAAAAGTGTGGCAGATGTTTTAGGGTATCT
AAATCCCTTAAGCAACATAAAAAAATCCACTTAA

Translation (267 aa):
MLSFRDVAVDFSAEEWECLEPAQWHLYRDVMLENYSHLVFLGLADSKPQLVTFLEQRQGSTGEERQAVKA
VFPGITPNDPNHYSKPTNCESLLLKRRRINTGEKPYKCEECGKALSSHKTLSIHQRLHTGDKPYKCEVCH
KAFCAPSSLFIHQKNHTDEKNFKCEDCGRTFYYLSMLKQHQRIHSGEKCYKCKNCGYASYDPSFLEQHQK
INCREKCYKCEDCHKAFHHQPLGYTREFILERNLSNVKSVADVLGYLNPLSNIKKST


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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