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Report for CCDS27384.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
27384.1 Public Mus musculus 15 Adamts12 23 108 98 CCDS HistoryNCBI Gene:239337Re-query CCDS DB by CCDS ID:27384.1Re-query CCDS DB by GeneID:239337See the combined annotation on chromosome 15 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 27384.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000061318.8 ENSMUSP00000057796.7 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000061318.8Link to Ensembl Protein Viewer:ENSMUSP00000057796.7Re-query CCDS DB by Nucleotide ID:ENSMUST00000061318Re-query CCDS DB by Protein ID:ENSMUSP00000057796
Original member Current member NCBI NM_175501.3 NP_780710.2 Accepted alive Link to Nucleotide Sequence:NM_175501.3Link to Protein Sequence:NP_780710.2Re-query CCDS DB by Nucleotide ID:NM_175501Re-query CCDS DB by Protein ID:NP_780710Link to BLAST:NP_780710.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_780710.2 1600 Q811B3-1 1600 100% 0 0

Chromosomal Locations for CCDS 27384.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 15 (NC_000081.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15See the combined annotation on chromosome 15 in Sequence Viewer

Chromosome Start Stop Links
15 11065031 11065157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11071499 11071866 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11151921 11152071 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11215541 11215737 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11217802 11217885 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11237534 11237658 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11241396 11241545 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11255549 11255692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11256909 11257053 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11258096 11258188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11258956 11259101 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11263284 11263453 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11270561 11270694 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11277336 11277456 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11285862 11286106 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11286711 11286849 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11292010 11292136 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11299895 11300105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11310536 11311645 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11317203 11317355 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11327679 11327858 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11331718 11331861 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11336295 11336454 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15
15 11345499 11345677 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 15Link to Ensembl Genome Browser on chromosome 15

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4803 nt):
ATGCCATGTGCTCGGGGGAGCTGGCTGGCCAAGCTCTCGATCGTGGCTCAGCTTATTAATTTTGGGGCTT
TTTGCCACGGGAGACAAACTCAGCCCTGGCCGGTTCGCTTCCCAGACCCGAGGCAAGAACATTTTATCAA
GTCCCTGCCAGAATACCACATAGTGAGTCCAGTCCAAGTCGATGCTGGTGGCCATGTTCTGTCCTATGGC
CTGCATCACCCTGTCACTAGCAGCAGGAAGAAGAGAGCTGCAGGTGGTTCTGGGGACCAGCTGTACTACA
GAATTTCGCATGAAGAAAAAGACCTGTTTTTCAATCTGACGGTCAACTGGGAATTTCTTTCCAACGGCTA
TGTCGTGGAGAAGAGATATGGGAACCTTTCCCATGTTAAGATGGTGGCTTCCTCAGGCCAGCCCTGCCAT
CTCAGGGGCACAGTTCTGCAGCAGGGCACCACAGTCGGGATCGGGACAGCAGCTCTCAGTGCCTGCCAAG
GACTGACTGGATTTTTCCATCTACCACATGGAGACTTTTTCATCGAGCCTGTTAAAAAGCATCCACTGAC
CGAGGAAGGGTCCTACCCTCATGTCGTATACAGGAGACAGAGCATCAGAGCTCCAGAGACAAAGGAGCCC
ATCTGTGGATTAAAGGACAGTCTTGATAACTCTGTGAAACAAGAGCTACAGCGGGAGAAGTGGGAGAGGA
AAACCTTGCGGAGCAGAAGCCTCTCCCGACGTTCCATAAGCAAGGAGAGATGGGTGGAGACCCTCGTGGT
GGCCGACACGAAGACGGTAGAGTACCATGGAAGCGAGAACGTGGAGTCGTACATCCTCACCATCATGAAT
ATGGTCACTGGGTTGTTTCATAGCCCAAGCATTGGCAATCTAGTCCACATTGTTGTGGTTCGGCTCATTC
TACTTGAAGAAGAGGAGCAAGGATTGAAAATAGTTCATCATGCAGAGAAGACACTGTCCAGTTTCTGCAA
GTGGCAGAAGAGCATCAATCCCAAGAGTGACCTCAACCCTGTCCATCATGATGTGGCTGTCCTTATCACC
AGAAAGGACATCTGTGCTGGTGTCAATCGCCCTTGTGAGACTCTGGGGCTGTCCCAATTGTCAGGAATGT
GCCAGCCTCACAGGAGCTGTAACATCAATGAAGACTCTGGCCTCCCCCTGGCTTTCACCATTGCACATGA
ACTTGGTCACAGCTTCGGCATCCAGCATGATGGAAAGGAAAATGACTGTGAGCCCGTGGGCAGGCACCCA
TACATCATGTCCCAACAGATTCAGTACGACCCAACTCCACTAACATGGTCGAAATGCAGCAAGGAGTACA
TCACTCGCTTCTTGGACCGAGGCAGGGGGTTCTGTCTTGATGATATCCCCAGCAAGAAAGGCTTGAAGTC
CAACGTCATTGCTCCTGGAGTAATTTACGATGTTCATCACCAGTGCCAGCTCCAATATGGCCCAAATGCT
ACATTCTGCCAGGAAGTGGAAAATGTTTGCCAGACACTGTGGTGCTCGGTGAAAGGCTTCTGTCGCTCTA
AGCTAGATGCTGCTGCAGACGGGACTCGTTGCGGTGAGAAGAAGTGGTGTATGGCTGGAAAGTGTATCAC
AGTGGGGAAGAAACCAGAGAGCATCCCTGGAGGCTGGGGACGCTGGTCACCCTGGTCACACTGTTCTAGA
ACATGTGGGGCAGGAGCTCAGAGCGCAGAGAGGCTCTGCAACAACCCAGAACCAAAATTTGGAGGGAAAT
ACTGCACCGGAGAAAGAAAACGCTATCGCTTATGCAATGTCCACCCCTGCCGCTCAGACACTCCAACTTT
CCGGCAGATGCAGTGCAGTGAATTTGACACAGTCCCCTACAAAAACCAATTCTACCGCTGGTTCCCAGTG
TTTAATGCAGCACATCCTTGTGAGCTGTACTGCAGACCCATAGATGAACAGTTTTCTGAGAGAATGCTGG
AAGCTGTCATTGATGGCACCCCATGCTTCGAAGGTGGCAACAGCAGAAATGTCTGTATTAATGGCATATG
TAAGAGGGTTGGCTGTGACTATGAGATTGATTCCAATGCTACAGAGGATCGCTGTGGTGTGTGCCTTGGA
GATGGCTCTGCCTGCCAGACGGTGAAGAAGCTGTTTAGACAGAAGGAAGGATCTGGTTACGTTGACATTG
GACTTATTCCCAAAGGTGCGAGGGATATAAGGGTGATGGAAATCAAGGCAGCTGGCAATTTCCTGGCCAT
TAGGAGTGAAGATCCGGAAAAATACTACCTCAACGGAGGGTTCATTATCCAGTGGAATGGAAACTATAAA
CTGGCAGGGACCGTTTTCCAGTATGACAGGAAAGGAGATCTGGAGAAACTTATAGCTCCAGGCCCCACCA
ACGAGTCAGTGTGGCTCCAGCTACTTTTCCAGGTGACTAACCCTGGTATCAAGTATGAGTACACAGTCCG
GAAAGATGGCCTTGACAATGACGTGGAGAAGTTGCTGTACTTCTGGCAATTTGGCCGCTGGACAGAATGC
AGTGTAACGTGTGGAACAGGTATCCGCCGGCAGGCTGCTCATTGTGTCAAGAAGGGCCACGGTATAGTGA
AAACGACCTTCTGTAACCCAGAAACACAGCCCAGCGTGAGACAGAAGAAGTGCCATGAAAAGGACTGTCC
ACCCAGGTGGTGGGCAGGGGAGTGGGAAGCGTGTTCAACGACATGTGGGCCCTACGGAGAAAAAAAGAGA
ACGGTGCTGTGCATCCAGACCATGGGCTCGGATGAACAGGCTCTCCCTGCTACAGACTGCCAGCACCTGC
TGAAGCCCAAAGCACTGGTTTCCTGCAACAGAGATATTCTGTGTCCATCAGACTGGACAGTAGGCAACTG
GAGTGAGTGCTCTGTTTCCTGTGGTGGTGGAGTGCGGATTCGCAGTGTCACATGTGCCAAGAACCTTAAT
GAGCCTTGTGACAAGACCCGGAAACCCAACAGTCGAGCTCTGTGCGGCCTCCAGCAGTGCCCATTTAGCC
GTAGAGTTCTGAAACCCAATAAAGATATAGCTCCCAGTGGGAAAAATCAATCGACAGCAGAACATGACCC
CTTCAAGCCCATCCCAGCACCAACATCCAGGCCCACGCCACTGTCCACACCCACAGTGCCTGAGTCTATG
AGCACAAGTACTCCCACAATCAACAGCCTTGGCTCCACCATAGCATCCCAAGAAGACGCAAATGGGATGG
GATGGCAGAATAATTCAACCCAAGCTGAAGAGGGCTCCCACTTCCCTACTTCTTCTGGAAGCACTTCCCA
GGTCCCCGTGACTTCCTGGTCTTTGAGTATCCAACCTGATGATGAGAATGTTTCCAGCTCAGCTATAGGT
CCTACTTCAGAGGGTGACTTTTGGGCAACCACAACAAGTGATTCTGGCTTATCATCTAGCGATGCTATGA
CTTGGCAGGTAACTCCATTTTATAGCACCATGACCACAGATCCAGAAGTGGAGATACATAGTGGTTCAGG
GGAAGACAGTGACCAGCCTTTGAACAAGGACAAAAGCAACTCTGTGATATGGAATAAGATCGGGGTACCT
GAACATGATGCTCCCATGGAGACGGATGCAGAACTACCACTTGGACCTCCACCAACATCTTATATGGGGG
AAGAGCCCTCATGGCCTCCCTTCAGTACAAAAATGGAAGGCTCATTACCTGCCTGGTCCTTCAAAAATGA
GACACCCAGGGATGATGGGATGATCGCTGAAAAATCAAGGAAGATTCCACTCCCTCTTGCAGGAGACCAC
CATCCAGCAACCTCAGAGAAGTTAGAAAACCATGACAAATTGGCATTGCCAAATACTACAAATCCAACCC
AAGGCTTTGGGCCTGTCCTGACTGAAGAAGATGCCTCCAATCTGATTGCCGAGGGGTTTTTGCTAAATGC
TTCTGATTACAAGCATCTTATGAAGGACCACAGCCCTGCATACTGGATTGTTGGAAACTGGAGTAAATGC
TCCACTACCTGTGGGCTGGGGGCCTACTGGAGGAGTGTGGAGTGCAGCTCTGGGGTGGACGCTGACTGCA
CAACCATTCAGAGGCCAGACCCTGCTAAGAAGTGCCACCTCCGCCCCTGTGCTGGCTGGCGAGTGGGAAA
CTGGAGCAAGTGCTCCCGAAATTGCAGTGGAGGCTTCAAGATTCGTGAGGTTCAGTGCATGGACAGCCTG
GACCACCACCGGAGCCTGAGGCCGTTTCACTGTCAATTCCTAGCTGGCGCTCCTCCTCCACTGAGTATGA
GCTGTAACCTGGAGCCTTGTGGAGAATGGCAAGTGGAGCCCTGGAGCCAGTGTTCTAGGTCCTGTGGAGG
AGGTGTTCAGGAGAGAGGAGTGTCTTGTCCTGGAGGCCTCTGTGACTGGACAAAAAGGCCTGCAACCACT
GTGCCCTGCAACAGACACCTTTGCTGTCACTGGGCCACTGGGAACTGGGAGCTGTGTAACACTTCCTGTG
GTGGTGGCTCTCAGAAAAGAACCATTCATTGCATCCCCTCAGAAAACAGTACAACTGAAGATCAAGACCA
GTGCCTCTGTGACCATCAAGTCAAACCCCCAGAATTCCAAACATGCAACCAGCAAGCCTGCAGGAAGAGT
GCTGATTTAACTTGCTTGAAGGACAGACTTTCAATCAGCTTCTGCCAGACACTGAAATCCATGAGGAAGT
GCTCTGTGCCATCAGTGCGAGCCCAGTGCTGTCTCTCGTGTCCACAGGCGCCCAGCATCCACACCCAGAG
GCAAAGAAAACAGCAGTTGCTCCAAAATCATGACATGCTCTAG

Translation (1600 aa):
MPCARGSWLAKLSIVAQLINFGAFCHGRQTQPWPVRFPDPRQEHFIKSLPEYHIVSPVQVDAGGHVLSYG
LHHPVTSSRKKRAAGGSGDQLYYRISHEEKDLFFNLTVNWEFLSNGYVVEKRYGNLSHVKMVASSGQPCH
LRGTVLQQGTTVGIGTAALSACQGLTGFFHLPHGDFFIEPVKKHPLTEEGSYPHVVYRRQSIRAPETKEP
ICGLKDSLDNSVKQELQREKWERKTLRSRSLSRRSISKERWVETLVVADTKTVEYHGSENVESYILTIMN
MVTGLFHSPSIGNLVHIVVVRLILLEEEEQGLKIVHHAEKTLSSFCKWQKSINPKSDLNPVHHDVAVLIT
RKDICAGVNRPCETLGLSQLSGMCQPHRSCNINEDSGLPLAFTIAHELGHSFGIQHDGKENDCEPVGRHP
YIMSQQIQYDPTPLTWSKCSKEYITRFLDRGRGFCLDDIPSKKGLKSNVIAPGVIYDVHHQCQLQYGPNA
TFCQEVENVCQTLWCSVKGFCRSKLDAAADGTRCGEKKWCMAGKCITVGKKPESIPGGWGRWSPWSHCSR
TCGAGAQSAERLCNNPEPKFGGKYCTGERKRYRLCNVHPCRSDTPTFRQMQCSEFDTVPYKNQFYRWFPV
FNAAHPCELYCRPIDEQFSERMLEAVIDGTPCFEGGNSRNVCINGICKRVGCDYEIDSNATEDRCGVCLG
DGSACQTVKKLFRQKEGSGYVDIGLIPKGARDIRVMEIKAAGNFLAIRSEDPEKYYLNGGFIIQWNGNYK
LAGTVFQYDRKGDLEKLIAPGPTNESVWLQLLFQVTNPGIKYEYTVRKDGLDNDVEKLLYFWQFGRWTEC
SVTCGTGIRRQAAHCVKKGHGIVKTTFCNPETQPSVRQKKCHEKDCPPRWWAGEWEACSTTCGPYGEKKR
TVLCIQTMGSDEQALPATDCQHLLKPKALVSCNRDILCPSDWTVGNWSECSVSCGGGVRIRSVTCAKNLN
EPCDKTRKPNSRALCGLQQCPFSRRVLKPNKDIAPSGKNQSTAEHDPFKPIPAPTSRPTPLSTPTVPESM
STSTPTINSLGSTIASQEDANGMGWQNNSTQAEEGSHFPTSSGSTSQVPVTSWSLSIQPDDENVSSSAIG
PTSEGDFWATTTSDSGLSSSDAMTWQVTPFYSTMTTDPEVEIHSGSGEDSDQPLNKDKSNSVIWNKIGVP
EHDAPMETDAELPLGPPPTSYMGEEPSWPPFSTKMEGSLPAWSFKNETPRDDGMIAEKSRKIPLPLAGDH
HPATSEKLENHDKLALPNTTNPTQGFGPVLTEEDASNLIAEGFLLNASDYKHLMKDHSPAYWIVGNWSKC
STTCGLGAYWRSVECSSGVDADCTTIQRPDPAKKCHLRPCAGWRVGNWSKCSRNCSGGFKIREVQCMDSL
DHHRSLRPFHCQFLAGAPPPLSMSCNLEPCGEWQVEPWSQCSRSCGGGVQERGVSCPGGLCDWTKRPATT
VPCNRHLCCHWATGNWELCNTSCGGGSQKRTIHCIPSENSTTEDQDQCLCDHQVKPPEFQTCNQQACRKS
ADLTCLKDRLSISFCQTLKSMRKCSVPSVRAQCCLSCPQAPSIHTQRQRKQQLLQNHDML


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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