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Genome Displays Related Resources Gene HomoloGene MANE RefSeq
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Report for CCDS20503.1 (current version)
CCDS |
Status |
Species |
Chrom. |
Gene |
CCDS Release |
NCBI Annotation Release |
Ensembl Annotation Release |
Links |
20503.1 |
Public |
Mus musculus |
6 |
Foxj2 |
23 |
108 |
98 |
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Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39
Review status: Reviewed (by RefSeq and Havana) Sequence IDs included in CCDS 20503.1
Original |
Current |
Source |
Nucleotide ID |
Protein ID |
Status in CCDS |
Seq. Status |
Links |
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EBI |
ENSMUST00000003238.13 |
ENSMUSP00000003238.7 |
Accepted |
alive |
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EBI |
ENSMUST00000177927.3 |
ENSMUSP00000137645.1 |
Accepted |
alive |
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NCBI |
NM_021899.3 |
NP_068699.1 |
Accepted |
alive |
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RefSeq |
Length |
Related UniProtKB/SwissProt |
Length |
Identity |
Gaps |
Mismatches |
NP_068699.1 |
565 |
Q9ES18 |
565 |
100% |
0 |
0 |
Chromosomal Locations for CCDS 20503.1
Assembly GRCm38.p6 (GCF_000001635.26)
CCDS Sequence Data |
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Blue highlighting indicates alternating exons. | Red highlighting indicates amino acids encoded across a splice junction. | | Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair. |
Nucleotide Sequence (1698 nt): ATGGCCTCCGACCTGGAGAGTAGCCTCACCTCCATAGACTGGCTGCCACAGCTGACTCTCAGAGCCACTA TTGAGAAGCTTGGGAGCGCTTCTCAGGCTGGGCCTCCAGGGGGCGCCCGGAAGTGCTCCCCAGGCTCGCC CACAGATCCCAACGCCACCCTCAGCAAAGATGAGGCAGCGGTCCACCAAGATGGCAAGCCACGGTACAGC TATGCCACCCTCATCACCTACGCCATCAACTCCTCCCCAGCTAAGAAGATGACTCTCAGTGAGATTTACC GCTGGATCTGCGACAACTTCCCCTATTACAAGAACGCTGGCATCGGTTGGAAGAATTCCATTCGACACAA CCTTTCCCTTAACAAGTGTTTCCGGAAGGTGCCCAGACCTCGGGATGACCCTGGGAAGGGCTCCTATTGG ACAATTGACACCTGCCCTGACATTTCCCGGAAGAGAAGACACCCTCCAGATGATGACCTATCCCAAGACT CCCCAGAGCAGGAAGCCAGCAAAAGCCCCCGGGGAGGTGTTCCAGGGAGTGGAGAAGCCTCACTCTCTCA CGAGGGGACTCCTCAGATGTCACTTCAGAGCCCCTCCTCCGTGGCCAACTACAGCCAGGGCCCAGGGTCT GTGGATGGTGGAGCAGTGGCAGCAGGGGCCCCAGGCCAGGAGAGCACAGAGGGCGCCCCTCCCCTCTACA ACACCAACCATGACTTCAAATTCTCCTACTCAGAGATCAACTTTCAGGACCTAAGCTGGTCCTTCCGCAA CCTCTACAAGTCCATGCTGGAGCGGTCCTCCTCCTCCCAGCACGGCTTTTCCTCACTCCTGGGAGACATG CCACCTTCTAACAACTACTACGTGTACCAGCAGCAGCAACAGCAGCAGCCACCACCACAGCCACAGCCAC CACCCCAGCAACCACAACCACAGCAGCAGCAGGCACCCACTCAGGGCCCCTCAAATGTAGGGGGTGCCCC TCCACTGCACACCCCAAGCCCTGATGGCTGTACTACACCAGGGGGAAAACAAGCGGGCGCTGAAGGCTAC GGCCCCCCGACTGGGATGGCCATGCATCCTCCCCCACTGCAGCACGGAGGCTACCACCCTCATCAGCACC ATCCCCACTCCCACCCTGCCCAGCAGCCACCACAGCCACAGGCGCAGAGCCAGGCATCCATCAACAGCAC TGGCTTTGCCTTTCCTCCTGACTGGTGCTCCAATATTGACTCCTTAAAGGAAAGCTTCAAAATGGTGAAC CGGCTCAACTGGTCCAGCATCGAGCAGTCCCAGTTCTCAGAGCTCATGGAGAGCCTACGGCAGGCAGAGC AGAGGAACTGGACCCTCGACCAGCATCACATCGCCAACTTGTGTGACTCCCTCAACCACTTCCTCACCCA GACTGGTCACATGCCCCAACAAGGGGGCTCCCACCGACCACCTGCCCCTTCCCGCATCACTGACTCCTGT GCCCTCACCAGTGGCAAACCGGAGCCATCCATGAACCAAGTGAACTCTTACGGGCACCCACAAGCTTCCC ATCTCTACCCTGGCCCAGCACCAATGTACCCGATCTCCACCCAAGACTCAGCAGGATACAACCGCCCAGC ACACCACATGGTTCCCCGGCCACCTGTCCCACCTCCTGGTGCCAATGAGGAGATCACCGATGACTTCGAC TGGGACTTGATCACTTAA
Translation (565 aa): MASDLESSLTSIDWLPQLTLRATIEKLGSASQAGPPGGARKCSPGSPTDPNATLSKDEAAVHQDGKPRYS YATLITYAINSSPAKKMTLSEIYRWICDNFPYYKNAGIGWKNSIRHNLSLNKCFRKVPRPRDDPGKGSYW TIDTCPDISRKRRHPPDDDLSQDSPEQEASKSPRGGVPGSGEASLSHEGTPQMSLQSPSSVANYSQGPGS VDGGAVAAGAPGQESTEGAPPLYNTNHDFKFSYSEINFQDLSWSFRNLYKSMLERSSSSQHGFSSLLGDM PPSNNYYVYQQQQQQQPPPQPQPPPQQPQPQQQQAPTQGPSNVGGAPPLHTPSPDGCTTPGGKQAGAEGY GPPTGMAMHPPPLQHGGYHPHQHHPHSHPAQQPPQPQAQSQASINSTGFAFPPDWCSNIDSLKESFKMVN RLNWSSIEQSQFSELMESLRQAEQRNWTLDQHHIANLCDSLNHFLTQTGHMPQQGGSHRPPAPSRITDSC ALTSGKPEPSMNQVNSYGHPQASHLYPGPAPMYPISTQDSAGYNRPAHHMVPRPPVPPPGANEEITDDFD WDLIT
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