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Report for CCDS17716.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
17716.1 Public Mus musculus 3 Ovgp1 23 108 98 CCDS HistoryNCBI Gene:12659Re-query CCDS DB by CCDS ID:17716.1Re-query CCDS DB by GeneID:12659See the combined annotation on chromosome 3 in Sequence Viewer

Public since: CCDS release 2, NCBI annotation release 36.1, Ensembl annotation release 39

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 17716.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000000573.8 ENSMUSP00000000573.2 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000000573.8Link to Ensembl Protein Viewer:ENSMUSP00000000573.2Re-query CCDS DB by Nucleotide ID:ENSMUST00000000573Re-query CCDS DB by Protein ID:ENSMUSP00000000573
Original member Current member NCBI NM_007696.2 NP_031722.1 Accepted alive Link to Nucleotide Sequence:NM_007696.2Link to Protein Sequence:NP_031722.1Re-query CCDS DB by Nucleotide ID:NM_007696Re-query CCDS DB by Protein ID:NP_031722Link to BLAST:NP_031722.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_031722.1 721 Q62010 721 100% 0 0

Chromosomal Locations for CCDS 17716.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 3 (NC_000069.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3See the combined annotation on chromosome 3 in Sequence Viewer

Chromosome Start Stop Links
3 105973816 105973840 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105974413 105974442 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105974839 105975043 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105975971 105976027 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105977664 105977829 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105978274 105978398 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105979898 105980006 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105980092 105980277 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105981233 105981349 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105985053 105985188 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3
3 105986069 105987078 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 3Link to Ensembl Genome Browser on chromosome 3

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2166 nt):
ATGGGGAGGCTGCTGCTGCTGGCTGGGCTGGTTCTTCTGATGAAACACAGTGATGGTACTGCCTACAAAC
TG
GTGTGCTATTTCACCAATTGGGCACATAGTCGGCCAGGCCCTGCCTCCATCATGCCCCATGACCTGGA
C
CCCTTTCTTTGTACGCATCTGATATTTGCCTTTGCCTCAATGAGCAACAATCAGATTGTGGCCAAGAAT
CTG
CAGGATGAAAACGTTCTCTATCCAGAGTTCAACAAACTCAAGGAAAGGAACAGGGAGCTGAAAACAC
TG
CTGTCCATTGGAGGGTGGAACTTCGGCACATCACGGTTCACCGCTATGCTCTCCACACTTGCCAACCG
G
GAAAAGTTTATTGACTCAGTCATATCCTTCCTGAGAATACATGGTTTTGATGGTCTTGACCTTTTCTTC
TTG
TACCCTGGACTACGAGGCAGTCCCCCACACGACCGGTGGAATTTTCTCTTCTTAATTGAAGAGCTCC
AG
TTTGCCTTCGAGAGGGAGGCCCTGCTCACTCAGCACCCACGGCTGCTGCTGTCGGCTGCTGTCTCTGG
C
ATCCCAAGCATCATCCATACGTCTTATGATGCGCTCCTTTTAGGAAGGCGTTTGGATTTCATTAATGTT
TTG
TCTTATGACTTACATGGAAGTTGGGAAAAGTTTACAGGACACAATAGTCCTCTGTTCTCCCTTCCCG
AA
GACTCCAAATCTTCAGCATATGCTATGAATTACTGGAGAAAGCTTGGGACACCCGCAGATAAACTTAT
T
ATGGGTTTCCCCACCTATGGACGTAACTTTTACCTCCTCAAAGAATCTAAGAATGGATTGCAGACTGCC
TCA
ATGGGACCAGCATCTCCTGGGAAGTACACCAAGCAGGCTGGCTTCTTGGCTTACTATGAGGTTTGTT
CC
TTTGTCCAGAGAGCAAAAAAACACTGGATTGATTATCAATATGTCCCGTATGCTTTTAAGGGGAAGGA
G
TGGCTTGGCTATGATGACACTATCAGTTTCAGTTACAAGGCAATGTATGTGAAGAGAGAGCATTTTGGG
GGG
GCCATGGTGTGGACACTGGATATGGACGATGTCAGGGGCACTTTCTGTGGCAACGGCCCTTTCCCTC
TT
GTTCATATATTGAATGAGCTCTTGGTGCAGACAGAATCCAATTCAACCCCCTTGCCACAATTTTGGTT
T
ACATCTTCTGTGAATGCCTCAGGACCTGGCTCTGAGAATACAGCCTTGACAGAGGTATTGACCACTGAT
ACC
ATAAAGATTTTGCCCCCGGGAGGAGAGGCTATGACCACCGAGGTCCACAGAAGGTATGAAAATATGA
CT
ACAGTTCCTAGTGATGGATCTGTAACCCCTGGAGGAACAGCATCTCCTCGAAAGCATGCTGTAACTCC
A
GAAAATAACACGATGGCTGCTGAGGCAAAAACTATGAGCACACTGGACTTCTTTTCTAAGACCACCACT
GGG
GTTTCTAAGACCACCACTGGGATCTCTAAGACCACCACTGGGGTTTCTAAGACCACAACTGGGGTTT
CT
AAGGCTACTGCTGGAATTTCTAAGACCATCCCTGAGATTTCTAAGGCCACTGCTGGGGTTTCTAAGAC
C
ACCACTGGTGTTTCTAAGACCACCACTGGCATTTCTAAGACCATCACTGGTGTTTCTAAGACCACCACT
GGC
ATTTCTAAGACCACCACTGGCATTTCTAAGACCACCACTGGGGTTTCTAAGATCACCACTGGTGTTT
CT
AAGACCACCACTGGCATTTCTAAGACCACCACTGGCATTTCTCAGACCACCACTGGCATTTCTAAGAC
C
ACCACTGACATTTCTAAGACCACCACTGGAATTTCTAAGACTACCCCTGGGATTTCTAAGACCACCCCT
GGG
ATGACAGTAATAGTCCAGACACAGGCAAATGAGGCAGAGACCACAGCCACAATGGATCATCAGTCTG
TA
ACCCCTACGGAGATGGATACGACTCTTTTCTATCTAAAGACTATGACTCCCAGTGAGAAGGAAACTTC
C
AGGAAGAAGACTATGGTACTTGAAAAGGCCACTGTTTCCCCTAGAGAGATGTCAGCTACCCCTAATGGA
CAG
AGTAAAACTCTAAAATGGGCAAGTTTGATTACTGAGGTAGAAACGTACTCCCAAGATGGGTGA


Translation (721 aa):
MGRLLLLAGLVLLMKHSDGTAYKLVCYFTNWAHSRPGPASIMPHDLDPFLCTHLIFAFASMSNNQIVAKN
L
QDENVLYPEFNKLKE
RNRELKTLLSIGGWNFGTSRFTAMLSTLANREKFIDSVISFLRIHGFDGLDLFF
L
YPGLRGSPPHDRWNFLFLIE
ELQFAFEREALLTQHPRLLLSAAVSGIPSIIHTSYDALLLGRRLDFINV
L
SYDLHGSWEKFTGHNSPLFSLPEDSKSS
AYAMNYWRKLGTPADKLIMGFPTYGRNFYLLKESKNGLQTA
S
MGPASPGKYTKQAGFLAYYE
VCSFVQRAKKHWIDYQYVPYAFKGKEWLGYDDTISFSYKAMYVKREHFG
G
AMVWTLDMDDVRGTFCGNGPFPLVHILNELLVQT
ESNSTPLPQFWFTSSVNASGPGSENTALTEVLTTD
T
IKILPPGGEAMTTEVHRRYENMTTVPSDGSVTPGGTASPRKHAVTPENNTMAAEAKTMSTLDFFSKTTT
G
VSKTTTGISKTTTGVSKTTTGVSKATAGISKTIPEISKATAGVSKTTTGVSKTTTGISKTITGVSKTTT
G
ISKTTTGISKTTTGVSKITTGVSKTTTGISKTTTGISQTTTGISKTTTDISKTTTGISKTTPGISKTTP
G
MTVIVQTQANEAETTATMDHQSVTPTEMDTTLFYLKTMTPSEKETSRKKTMVLEKATVSPREMSATPNG
Q
SKTLKWASLITEVETYSQDG




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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