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Report for CCDS8885.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
8885.1 Public Homo sapiens 12 MUCL1 24 110 108 CCDS HistoryNCBI Gene:118430Re-query CCDS DB by CCDS ID:8885.1Re-query CCDS DB by GeneID:118430See the combined annotation on chromosome 12 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 8885.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000308796.11 ENSP00000311364.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000308796.11Link to Ensembl Protein Viewer:ENSP00000311364.5Re-query CCDS DB by Nucleotide ID:ENST00000308796Re-query CCDS DB by Protein ID:ENSP00000311364
Original member Current member NCBI NM_058173.3 NP_477521.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_058173.3Link to Protein Sequence:NP_477521.1Re-query CCDS DB by Nucleotide ID:NM_058173Re-query CCDS DB by Protein ID:NP_477521Link to BLAST:NP_477521.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_477521.1 90 Q96DR8 90 100% 0 0

Chromosomal Locations for CCDS 8885.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 12 (NC_000012.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12See the combined annotation on chromosome 12 in Sequence Viewer

Chromosome Start Stop Links
12 54854583 54854640 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54855116 54855157 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54856770 54856892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12
12 54858193 54858242 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 12Link to Ensembl Genome Browser on chromosome 12

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (273 nt):
ATGAAGTTCTTAGCAGTCCTGGTACTCTTGGGAGTTTCCATCTTTCTGGTCTCTGCCCAGAATCCGACAA
CAGCTGCTCCAGCTGACACGTATCCAGCTACTGGTCCTGCTGATGATGAAGCCCCTGATGCTGAAACCAC
TGCTGCTGCAACCACTGCAACCACTGCTGCTCCTACCACTGCAACCACCGCTGCTTCTACCACTGCTCGT
AAAGACATTCCAGTTTTACCCAAATGGGTTGGGGATCTCCCGAATGGTAGAGTGTGTCCCTGA

Translation (90 aa):
MKFLAVLVLLGVSIFLVSAQNPTTAAPADTYPATGPADDEAPDAETTAAATTATTAAPTTATTAASTTAR
KDIPVLPKWVGDLPNGRVCP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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