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Report for CCDS30737.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
30737.1 Public Homo sapiens 1 EFCAB7 24 110 108 CCDS HistoryNCBI Gene:84455Re-query CCDS DB by CCDS ID:30737.1See the combined annotation on chromosome 1 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 30737.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000371088.5 ENSP00000360129.4 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000371088.5Link to Ensembl Protein Viewer:ENSP00000360129.4Re-query CCDS DB by Nucleotide ID:ENST00000371088Re-query CCDS DB by Protein ID:ENSP00000360129
Original member Current member NCBI NM_032437.4 NP_115813.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_032437.4Link to Protein Sequence:NP_115813.2Re-query CCDS DB by Nucleotide ID:NM_032437Re-query CCDS DB by Protein ID:NP_115813Link to BLAST:NP_115813.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_115813.2 629 A8K855-1 629 100% 0 0

Chromosomal Locations for CCDS 30737.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 1 (NC_000001.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1See the combined annotation on chromosome 1 in Sequence Viewer

Chromosome Start Stop Links
1 63525573 63525759 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63531820 63532031 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63532670 63532756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63533454 63533649 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63534095 63534216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63545916 63546057 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63551725 63551834 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63555358 63555515 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63557114 63557247 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63561709 63561857 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63568310 63568519 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63571021 63571128 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1
1 63572442 63572516 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 1Link to Ensembl Genome Browser on chromosome 1

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1890 nt):
ATGGCGATCAGTCCACGAAGCGATGCAACTTTCTCCAGTCAGAAATCAACACCTTCAGAGAGTCCTCGAA
CAAAGAAATTTCCACTAACTGAAGAGGAAATATTTTATATGAATTGTAGAGCTGCCTACTTAACTGTCTT
CAAAAGCAGCTTGGAAAACATTATTTCTAAAGATCAACTTTACTTAGCTCTTCAGCATGCAGGAAGAAAT
CCATCCCAAAAGACCATTAATAAGTATTGGACTCCTCAAACTGCCAAACTGAATTTTGATGATTTTTGTA
TAATTTTAAGGAAGGAAAAACCTACTTCAAAAGCAGAACTACTAAAATCATTTAAGCAATTAGATGTAAA
TGATGATGGCTGTATTTTACACACTGACCTTTATAAATTTCTAACAAAGAGAGGTGAGAAGATGACTCGA
GAAGAAGTAAATGCCATAATAAATTTGGCTGATGTAAATGCTGATGGCAAATTTGACTACATCAAGTTTT
GTAAATTATATATGACAACCAACGAGCAATGTCTCAAGACTACACTAGAAAAACTAGAGGTTGACAGTAA
ATTGATGCGTCACCAGTTTGGAAACCACATCGAAGGGTCCCCTGAAAGGGACCCATCACCAGTACCAAAA
CCATCACCTAAAATCACAAGAAAAACTGATCCAGAAACATTCTTAAATAAAGGTGACACCAGGAGTTCTT
TACTGTCAGCAACCAGGAAGTTCAAAACATCTGTTTCCTTCACAGTTACCATGGGGGCTAATGGTAACCG
AAACTCAAAGTTAATGGAGCCAAATTTAATAAAGGACTGGCAACACATGCAATCAAAAGGTTGCTTCTTC
TTAGAAGAAGATGGTGAAATCATTAGTCATCAGTACAGGATGCAAATAGCTCAGAGGTCCATGGTTTATC
TAACAATTAAGCCATTAAACCTGAGTCAAGTTGAAGGAAAACCATCCCCTTGGTTATCCGTTGATACTGC
CTTGTATATTCTCAAGGAAAATGAGAGTCAAGCAAATCTACAGCTTGTGTGTTTTACCGAACTACGAAAT
AGAGAAGTGTTTGGATGGACTGGTGAACTAGGACCTGGAATTTACTGGTTAATTCCTTCCACAACTGGCT
GTAGGCTGAGGAAAAAAATAAAACCAGTAACAGATGAAGCCCAACTTGTATATAGAGATGAAACAGGGGA
ATTATTCCTTACAAAGGAATTTAAGTCTACTTTATCAGATATATTTGAAGTAATTGATTTAGATGGAAAT
GGTCTTCTTAGCCTTGAAGAATATAATTTTTTTGAATTGAGAACAAGTGGTGAGAAATGTGATGAAGATG
CTTGGGCTGTCTGCAGAGAGAATTTTGATACAAAGAGGAATGAACTAACAAGACAAGGATTTATGGATTT
GAATCTAATGGAAGCTAATGATCGAGAAGGAGATCCTTGTGACCTTTGGGTAACTCTACACTCTATGGGC
TACAATAAAGCTCTGGAGTTGACAGAGGCATGTCCATTTGTCATTGATATCTATGCAGAAAAATGCAAGC
CAAAAATTAAAGCTGTCCATATGGAGGCATGTAGTGGACAACTTGAGAAGGCCATTTGTAAATCTGTTCT
TAGCAACGGTGATGCCAAAGTAATGGATGGCTATGAAAATATAATCGTGCATACTTACAGTTGTGACACC
TGGATAACGTCAGTTATTGAAAACAAGTCAGATGAGAAAGTGATTATTCACATCAGCAATGAGCTAAGTA
AAAACTGCATAAACAACAGAGGACTCAACATATTTGCAGTAGAAGTGGGACCCAAATCTACAATGGTTTG
TCAACATGTAATGCCTTTGAATGAACGACAAGAATGGATATATTATTGTATATATTCTCTTATTTCTTAA

Translation (629 aa):
MAISPRSDATFSSQKSTPSESPRTKKFPLTEEEIFYMNCRAAYLTVFKSSLENIISKDQLYLALQHAGRN
PSQKTINKYWTPQTAKLNFDDFCIILRKEKPTSKAELLKSFKQLDVNDDGCILHTDLYKFLTKRGEKMTR
EEVNAIINLADVNADGKFDYIKFCKLYMTTNEQCLKTTLEKLEVDSKLMRHQFGNHIEGSPERDPSPVPK
PSPKITRKTDPETFLNKGDTRSSLLSATRKFKTSVSFTVTMGANGNRNSKLMEPNLIKDWQHMQSKGCFF
LEEDGEIISHQYRMQIAQRSMVYLTIKPLNLSQVEGKPSPWLSVDTALYILKENESQANLQLVCFTELRN
REVFGWTGELGPGIYWLIPSTTGCRLRKKIKPVTDEAQLVYRDETGELFLTKEFKSTLSDIFEVIDLDGN
GLLSLEEYNFFELRTSGEKCDEDAWAVCRENFDTKRNELTRQGFMDLNLMEANDREGDPCDLWVTLHSMG
YNKALELTEACPFVIDIYAEKCKPKIKAVHMEACSGQLEKAICKSVLSNGDAKVMDGYENIIVHTYSCDT
WITSVIENKSDEKVIIHISNELSKNCINNRGLNIFAVEVGPKSTMVCQHVMPLNERQEWIYYCIYSLIS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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