NCBI CCDS banner
PubMed Entrez Gene BLAST OMIM
  

CCDS
Home
FTP
Process
Releases & Statistics

Collaborators
EBI
HGNC
MGI
NCBI

Contact Us
email CCDS

Genome Displays

Ensembl
NCBI
UCSC
VEGA

Related Resources
Gene
HomoloGene
MANE
RefSeq


Report for CCDS12654.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12654.1 Public Homo sapiens 19 GEMIN7 24 110 108 CCDS HistoryNCBI Gene:79760Re-query CCDS DB by CCDS ID:12654.1See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12654.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000270257.9 ENSP00000270257.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000270257.9Link to Ensembl Protein Viewer:ENSP00000270257.3Re-query CCDS DB by Nucleotide ID:ENST00000270257Re-query CCDS DB by Protein ID:ENSP00000270257
Original member Current member EBI ENST00000391951.2 ENSP00000375813.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000391951.2Link to Ensembl Protein Viewer:ENSP00000375813.1Re-query CCDS DB by Nucleotide ID:ENST00000391951Re-query CCDS DB by Protein ID:ENSP00000375813
Original member Current member EBI ENST00000591747.5 ENSP00000465704.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591747.5Link to Ensembl Protein Viewer:ENSP00000465704.1Re-query CCDS DB by Nucleotide ID:ENST00000591747Re-query CCDS DB by Protein ID:ENSP00000465704
Original member Current member EBI ENST00000591607.1 ENSP00000466342.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000591607.1Link to Ensembl Protein Viewer:ENSP00000466342.1Re-query CCDS DB by Nucleotide ID:ENST00000591607Re-query CCDS DB by Protein ID:ENSP00000466342
Original member Current member NCBI NM_001007269.2 NP_001007270.1 Accepted alive Link to Nucleotide Sequence:NM_001007269.2Link to Protein Sequence:NP_001007270.1Re-query CCDS DB by Nucleotide ID:NM_001007269Re-query CCDS DB by Protein ID:NP_001007270Link to BLAST:NP_001007270.1
Original member Current member NCBI NM_001007270.2 NP_001007271.1 Accepted alive Link to Nucleotide Sequence:NM_001007270.2Link to Protein Sequence:NP_001007271.1Re-query CCDS DB by Nucleotide ID:NM_001007270Re-query CCDS DB by Protein ID:NP_001007271Link to BLAST:NP_001007271.1
Original member Current member NCBI NM_001319054.1 NP_001305983.1 Accepted alive Link to Nucleotide Sequence:NM_001319054.1Link to Protein Sequence:NP_001305983.1Re-query CCDS DB by Nucleotide ID:NM_001319054Re-query CCDS DB by Protein ID:NP_001305983Link to BLAST:NP_001305983.1
Original member Current member NCBI NM_001319055.2 NP_001305984.1 Accepted alive Link to Nucleotide Sequence:NM_001319055.2Link to Protein Sequence:NP_001305984.1Re-query CCDS DB by Nucleotide ID:NM_001319055Re-query CCDS DB by Protein ID:NP_001305984Link to BLAST:NP_001305984.1
Original member Current member NCBI NM_024707.3 NP_078983.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024707.3Link to Protein Sequence:NP_078983.1Re-query CCDS DB by Nucleotide ID:NM_024707Re-query CCDS DB by Protein ID:NP_078983Link to BLAST:NP_078983.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001007270.1 131 Q9H840 131 100% 0 0
NP_001007271.1 131 Q9H840 131 100% 0 0
NP_001305983.1 131 Q9H840 131 100% 0 0
NP_001305984.1 131 Q9H840 131 100% 0 0
NP_078983.1 131 Q9H840 131 100% 0 0

Chromosomal Locations for CCDS 12654.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 45090115 45090510 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (396 nt):
ATGCAAACTCCAGTGAACATTCCCGTGCCTGTGCTCCGGCTGCCCCGGGGCCCTGATGGCTTCAGCCGTG
GCTTTGCCCCTGATGGACGCAGAGCCCCCTTGAGGCCAGAGGTTCCTGAAATCCAGGAGTGTCCCATAGC
TCAAGAATCCCTGGAATCCCAGGAGCAGCGGGCACGAGCCGCCCTTCGGGAGCGTTACCTCCGCAGCCTG
CTGGCCATGGTGGGTCATCAGGTGAGCTTCACGTTGCACGAGGGTGTGCGTGTGGCCGCCCACTTTGGAG
CCACCGACCTGGATGTGGCCAACTTCTACGTGTCACAGCTGCAGACTCCCATAGGTGTGCAAGCAGAGGC
GCTGCTCCGATGTAGTGACATTATTTCATATACCTTCAAGCCATAA

Translation (131 aa):
MQTPVNIPVPVLRLPRGPDGFSRGFAPDGRRAPLRPEVPEIQECPIAQESLESQEQRARAALRERYLRSL
LAMVGHQVSFTLHEGVRVAAHFGATDLDVANFYVSQLQTPIGVQAEALLRCSDIISYTFKP


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

Disclaimer | Write to the Help Desk
NCBI | NLM | NIH