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Report for CCDS56564.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
56564.1 Public Homo sapiens 9 IL33 24 110 108 CCDS HistoryNCBI Gene:90865Re-query CCDS DB by CCDS ID:56564.1Re-query CCDS DB by GeneID:90865See the combined annotation on chromosome 9 in Sequence Viewer

Public since: CCDS release 9, NCBI annotation release 37.3, Ensembl annotation release 64

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 56564.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000417746.6 ENSP00000394039.2 Accepted alive Link to Ensembl Transcript Viewer:ENST00000417746.6Link to Ensembl Protein Viewer:ENSP00000394039.2Re-query CCDS DB by Nucleotide ID:ENST00000417746Re-query CCDS DB by Protein ID:ENSP00000394039
Original member Current member NCBI NM_001199641.2 NP_001186570.1 Accepted alive Link to Nucleotide Sequence:NM_001199641.2Link to Protein Sequence:NP_001186570.1Re-query CCDS DB by Nucleotide ID:NM_001199641Re-query CCDS DB by Protein ID:NP_001186570Link to BLAST:NP_001186570.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001186570.1 144 O95760-4 144 100% 0 0

Chromosomal Locations for CCDS 56564.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 9 (NC_000009.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9See the combined annotation on chromosome 9 in Sequence Viewer

Chromosome Start Stop Links
9 6241695 6241785 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 6253552 6253602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 6254462 6254553 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9
9 6255968 6256168 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 9Link to Ensembl Genome Browser on chromosome 9

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (435 nt):
ATGAAGCCTAAAATGAAGTATTCAACCAACAAAATTTCCACAGCAAAGTGGAAGAACACAGCAAGCAAAG
CCTTGTGTTTCAAGCTGGGAAATAAGGTGTTACTGAGTTACTATGAGTCTCAACACCCCTCAAATGAATC
AGGTGACGGTGTTGATGGTAAGATGTTAATGGTAACCCTGAGTCCTACAAAAGACTTCTGGTTGCATGCC
AACAACAAGGAACACTCTGTGGAGCTCCATAAGTGTGAAAAACCACTGCCAGACCAGGCCTTCTTTGTCC
TTCATAATATGCACTCCAACTGTGTTTCATTTGAATGCAAGACTGATCCTGGAGTGTTTATAGGTGTAAA
GGATAATCATCTTGCTCTGATTAAAGTAGACTCTTCTGAGAATTTGTGTACTGAAAATATCTTGTTTAAG
CTCTCTGAAACTTAG

Translation (144 aa):
MKPKMKYSTNKISTAKWKNTASKALCFKLGNKVLLSYYESQHPSNESGDGVDGKMLMVTLSPTKDFWLHA
NNKEHSVELHKCEKPLPDQAFFVLHNMHSNCVSFECKTDPGVFIGVKDNHLALIKVDSSENLCTENILFK
LSET


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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