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Report for CCDS5469.2 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5469.2 Public Homo sapiens 7 HECW1 24 110 108 CCDS HistoryNCBI Gene:23072Re-query CCDS DB by CCDS ID:5469.2Re-query CCDS DB by GeneID:23072See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq, Havana and CCDS collaboration)

Sequence IDs included in CCDS 5469.2

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000395891.7 ENSP00000379228.1 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000395891.7Link to Ensembl Protein Viewer:ENSP00000379228.1Re-query CCDS DB by Nucleotide ID:ENST00000395891Re-query CCDS DB by Protein ID:ENSP00000379228
Original member Current member NCBI NM_015052.5 NP_055867.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_015052.5Link to Protein Sequence:NP_055867.3Re-query CCDS DB by Nucleotide ID:NM_015052Re-query CCDS DB by Protein ID:NP_055867Link to BLAST:NP_055867.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_055867.3 1606 Q76N89-1 1606 100% 0 0

Chromosomal Locations for CCDS 5469.2

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 43243906 43243932 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43311763 43312087 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43320635 43320742 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43360886 43360980 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43396814 43396889 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43407562 43407731 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43438003 43438145 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43442529 43442629 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43444218 43445570 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43450828 43450929 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43456297 43456447 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43463660 43463799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43466447 43466568 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43468920 43469105 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43479610 43479744 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43492075 43492180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43493084 43493180 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43500699 43500782 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43501213 43501322 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43507137 43507257 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43508018 43508131 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43508969 43509121 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43541163 43541261 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43541869 43541998 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43550445 43550591 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43552222 43552336 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43554592 43554790 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 43561815 43561926 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (4821 nt):
ATGCTGCTGCACCTGTGTAGTGTGAAGAATCTGTACCAGAACAGGTTTTTAGGCCTGGCCGCCATGGCGT
CTCCTTCTAGAAACTCCCAGAGCCGACGCCGGTGCAAGGAGCCGCTCCGATACAGCTACAACCCCGACCA
GTTCCACAACATGGACCTCAGGGGCGGCCCCCACGATGGCGTCACCATTCCCCGCTCCACCAGCGACACT
GACCTGGTCACCTCGGACAGCCGCTCCACGCTCATGGTCAGCAGCTCCTACTATTCCATCGGGCACTCTC
AGGACCTGGTCATCCACTGGGACATAAAGGAGGAAGTGGACGCTGGGGACTGGATTGGCATGTACCTCAT
TGATGAGGTCTTGTCCGAAAACTTTCTGGACTATAAAAACCGTGGAGTCAATGGTTCTCATCGGGGCCAG
ATCATCTGGAAGATCGATGCCAGCTCGTACTTTGTGGAACCTGAAACTAAGATCTGCTTCAAATACTACC
ATGGAGTGAGTGGGGCCCTGCGAGCAACCACCCCCAGTGTCACGGTCAAAAACTCGGCAGCTCCTATTTT
TAAAAGCATTGGTGCTGATGAGACCGTCCAAGGACAAGGAAGTCGGAGGCTGATCAGCTTCTCTCTCTCA
GATTTCCAAGCCATGGGGTTGAAGAAAGGGATGTTTTTCAACCCAGACCCTTATCTGAAGATTTCCATTC
AGCCTGGGAAACACAGCATCTTCCCCGCCCTCCCTCACCATGGACAGGAGAGGAGATCCAAGATCATAGG
CAACACCGTGAACCCCATCTGGCAGGCCGAGCAATTCAGTTTTGTGTCCTTGCCCACTGACGTGCTGGAA
ATTGAGGTGAAGGACAAGTTTGCCAAGAGCCGCCCCATCATCAAGCGCTTCTTGGGAAAGCTGTCGATGC
CCGTTCAAAGACTCCTGGAGAGACACGCCATAGGGGATAGGGTGGTCAGCTACACACTTGGCCGCAGGCT
TCCAACAGATCATGTGAGTGGACAGCTGCAATTCCGATTTGAGATCACTTCCTCCATCCACCCAGATGAT
GAGGAGATTTCCCTGAGTACCGAGCCTGAGTCAGCCCAAATTCAGGACAGCCCCATGAACAACCTGATGG
AAAGCGGCAGTGGGGAACCTCGGTCTGAGGCACCAGAGTCCTCTGAGAGCTGGAAGCCAGAGCAGCTGGG
TGAGGGCAGTGTCCCCGATGGTCCAGGGAACCAAAGCATAGAGCTTTCCAGACCAGCTGAGGAAGCAGCA
GTCATCACGGAGGCAGGAGACCAGGGCATGGTCTCTGTGGGACCTGAAGGGGCTGGGGAGCTCCTGGCCC
AGGTGCAAAAGGACATCCAGCCTGCCCCCAGTGCAGAAGAGCTGGCCGAGCAGCTGGACCTGGGTGAGGA
GGCATCAGCACTGCTGCTGGAAGACGGTGAAGCCCCAGCCAGCACCAAGGAGGAGCCCTTGGAGGAGGAA
GCAACGACCCAGAGCCGGGCTGGAAGGGAAGAAGAGGAGAAGGAGCAGGAGGAGGAGGGAGATGTGTCTA
CCCTGGAGCAGGGAGAGGGCAGGCTGCAGCTGCGGGCCTCGGTGAAGAGAAAAAGCAGGCCCTGCTCCTT
GCCTGTGTCCGAGCTGGAGACGGTGATCGCGTCAGCCTGCGGGGACCCCGAGACCCCGCGGACACACTAC
ATCCGCATCCACACCCTGCTGCACAGCATGCCCTCCGCCCAGGGCGGCAGCGCGGCAGAGGAGGAGGACG
GCGCGGAGGAGGAGTCCACCCTCAAGGACTCCTCGGAGAAGGATGGGCTCAGCGAGGTGGACACGGTGGC
CGCTGACCCGTCTGCCCTGGAAGAGGACAGAGAAGAGCCCGAGGGGGCTACTCCAGGCACGGCGCACCCT
GGCCACTCCGGGGGCCACTTCCCCAGCCTGGCCAATGGCGCGGCCCAGGATGGCGACACGCACCCCAGCA
CCGGGAGCGAGAGCGACTCCAGCCCCAGGCAAGGCGGGGACCACAGTTGCGAGGGCTGTGACGCGTCCTG
CTGCAGCCCCTCGTGCTACAGCTCCTCGTGCTACAGCACGTCCTGCTACAGCAGCTCGTGCTACAGCGCC
TCGTGCTACAGCCCCTCCTGCTACAACGGCAACAGGTTCGCCAGCCACACGCGCTTCTCCTCCGTGGACA
GCGCCAAGATCTCCGAGAGCACGGTCTTCTCCTCGCAAGACGACGAGGAGGAGGAGAACAGCGCGTTCGA
GTCGGTACCCGACTCCATGCAGAGCCCTGAGCTGGACCCGGAGTCCACGAACGGCGCTGGGCCGTGGCAA
GACGAGCTGGCCGCCCCTAGCGGGCACGTGGAAAGAAGCCCGGAAGGTCTGGAATCCCCCGTGGCAGGTC
CAAGCAATCGGAGAGAAGGTGAATGTCCTATACTCCATAATTCCCAGCCAGTAAGCCAGCTTCCTTCCCT
GAGGCCTGAACATCATCACTACCCAACAATCGATGAGCCTCTTCCACCAAACTGGGAAGCTCGAATTGAC
AGCCACGGGCGGGTCTTTTATGTGGACCACGTGAACCGCACAACCACCTGGCAGCGTCCGACGGCAGCAG
CCACCCCGGATGGCATGCGGAGATCGGGGTCCATCCAGCAGATGGAGCAACTCAACAGGCGGTATCAAAA
CATTCAGCGAACCATTGCAACAGAGAGGTCCGAAGAAGATTCTGGCAGCCAAAGCTGCGAGCAAGCCCCA
GCAGGAGGAGGCGGAGGTGGAGGGAGTGACTCAGAAGCCGAATCTTCCCAGTCCAGCTTAGATCTAAGGA
GAGAAGGGTCACTTTCTCCAGTGAACTCACAAAAAATCACCTTGCTGCTGCAGTCCCCAGCGGTCAAGTT
CATCACCAACCCCGAGTTCTTCACTGTGCTACATGCCAATTATAGTGCCTACCGAGTCTTCACCAGTAGC
ACCTGCTTAAAGCACATGATTCTGAAAGTCCGACGGGATGCTCGCAATTTTGAACGCTACCAGCACAACC
GGGACTTGGTGAATTTCATCAACATGTTCGCAGACACTCGGCTGGAACTGCCCCGGGGCTGGGAGATCAA
AACGGACCAGCAGGGAAAGTCTTTTTTCGTGGACCACAACAGTCGAGCTACCACTTTCATTGACCCCCGA
ATCCCTCTTCAGAACGGTCGTCTTCCCAATCATCTAACTCACCGACAGCACCTCCAGAGGCTCCGAAGTT
ACAGCGCTGGAGAGGCCTCAGAAGTTTCTAGAAACAGAGGAGCCTCTTTACTGGCCAGGCCAGGACACAG
CTTAGTAGCTGCTATTCGAAGCCAACATCAACATGAGTCATTGCCACTGGCATATAATGACAAGATTGTG
GCATTTCTTCGCCAGCCAAACATTTTTGAAATGCTGCAAGAGCGTCAGCCAAGCTTAGCAAGAAACCACA
CACTCAGGGAGAAAATCCATTACATTCGGACTGAGGGTAATCACGGGCTTGAGAAGTTGTCCTGTGATGC
GGATCTGGTCATTTTGCTGAGTCTCTTTGAAGAAGAGATTATGTCCTACGTCCCCCTGCAGGCTGCCTTC
CACCCTGGGTATAGCTTCTCTCCCCGATGTTCACCCTGTTCTTCACCTCAGAACTCCCCAGGTTTACAGA
GAGCCAGTGCAAGAGCCCCTTCCCCCTACCGAAGAGACTTTGAGGCCAAGCTCCGCAATTTCTACAGAAA
ACTGGAAGCCAAAGGATTTGGTCAGGGTCCGGGGAAAATTAAGCTCATTATTCGCCGGGATCATTTGTTG
GAGGGAACCTTCAATCAGGTGATGGCCTATTCGCGGAAAGAGCTCCAGCGAAACAAGCTCTACGTCACCT
TTGTTGGAGAGGAGGGCCTGGACTACAGTGGCCCCTCGCGGGAGTTCTTCTTCCTTCTGTCTCAGGAGCT
CTTCAACCCTTACTATGGACTCTTTGAGTACTCGGCAAATGATACTTACACGGTGCAGATCAGCCCCATG
TCCGCATTTGTAGAAAACCATCTTGAGTGGTTCAGGTTTAGCGGTCGCATCCTGGGTCTGGCTCTGATCC
ATCAGTACCTTCTTGACGCTTTCTTCACGAGGCCCTTCTACAAGGCACTCCTGAGACTGCCCTGTGATTT
GAGTGACCTGGAATATTTGGATGAGGAATTCCACCAGAGTTTGCAGTGGATGAAGGACAACAACATCACA
GACATCTTAGACCTCACTTTCACTGTTAATGAAGAGGTTTTTGGACAGGTCACGGAAAGGGAGTTGAAGT
CTGGAGGAGCCAACACACAGGTGACGGAGAAAAACAAGAAGGAGTACATCGAGCGCATGGTGAAGTGGCG
GGTGGAGCGCGGCGTGGTACAGCAGACCGAGGCGCTGGTGCGCGGCTTCTACGAGGTTGTAGACTCGAGG
CTGGTGTCCGTGTTTGATGCCAGGGAGCTGGAGCTGGTGATAGCTGGCACCGCGGAAATCGACCTAAATG
ACTGGCGGAATAACACTGAGTACCGGGGAGGTTACCACGATGGGCATCTTGTGATCCGCTGGTTCTGGGC
TGCGGTGGAGCGCTTCAATAATGAGCAGAGGCTGAGATTACTGCAGTTTGTCACGGGAACATCCAGCGTG
CCCTACGAAGGCTTCGCAGCCCTCCGTGGGAGCAATGGGCTTCGGCGCTTCTGCATAGAGAAATGGGGGA
AAATTACTTCTCTCCCCAGGGCACACACATGCTTCAACCGACTGGATCTTCCACCGTATCCCTCGTACTC
CATGTTGTATGAAAAGCTGTTAACAGCAGTAGAGGAAACCAGCACCTTTGGACTTGAGTGA

Translation (1606 aa):
MLLHLCSVKNLYQNRFLGLAAMASPSRNSQSRRRCKEPLRYSYNPDQFHNMDLRGGPHDGVTIPRSTSDT
DLVTSDSRSTLMVSSSYYSIGHSQDLVIHWDIKEEVDAGDWIGMYLIDEVLSENFLDYKNRGVNGSHRGQ
IIWKIDASSYFVEPETKICFKYYHGVSGALRATTPSVTVKNSAAPIFKSIGADETVQGQGSRRLISFSLS
DFQAMGLKKGMFFNPDPYLKISIQPGKHSIFPALPHHGQERRSKIIGNTVNPIWQAEQFSFVSLPTDVLE
IEVKDKFAKSRPIIKRFLGKLSMPVQRLLERHAIGDRVVSYTLGRRLPTDHVSGQLQFRFEITSSIHPDD
EEISLSTEPESAQIQDSPMNNLMESGSGEPRSEAPESSESWKPEQLGEGSVPDGPGNQSIELSRPAEEAA
VITEAGDQGMVSVGPEGAGELLAQVQKDIQPAPSAEELAEQLDLGEEASALLLEDGEAPASTKEEPLEEE
ATTQSRAGREEEEKEQEEEGDVSTLEQGEGRLQLRASVKRKSRPCSLPVSELETVIASACGDPETPRTHY
IRIHTLLHSMPSAQGGSAAEEEDGAEEESTLKDSSEKDGLSEVDTVAADPSALEEDREEPEGATPGTAHP
GHSGGHFPSLANGAAQDGDTHPSTGSESDSSPRQGGDHSCEGCDASCCSPSCYSSSCYSTSCYSSSCYSA
SCYSPSCYNGNRFASHTRFSSVDSAKISESTVFSSQDDEEEENSAFESVPDSMQSPELDPESTNGAGPWQ
DELAAPSGHVERSPEGLESPVAGPSNRREGECPILHNSQPVSQLPSLRPEHHHYPTIDEPLPPNWEARID
SHGRVFYVDHVNRTTTWQRPTAAATPDGMRRSGSIQQMEQLNRRYQNIQRTIATERSEEDSGSQSCEQAP
AGGGGGGGSDSEAESSQSSLDLRREGSLSPVNSQKITLLLQSPAVKFITNPEFFTVLHANYSAYRVFTSS
TCLKHMILKVRRDARNFERYQHNRDLVNFINMFADTRLELPRGWEIKTDQQGKSFFVDHNSRATTFIDPR
IPLQNGRLPNHLTHRQHLQRLRSYSAGEASEVSRNRGASLLARPGHSLVAAIRSQHQHESLPLAYNDKIV
AFLRQPNIFEMLQERQPSLARNHTLREKIHYIRTEGNHGLEKLSCDADLVILLSLFEEEIMSYVPLQAAF
HPGYSFSPRCSPCSSPQNSPGLQRASARAPSPYRRDFEAKLRNFYRKLEAKGFGQGPGKIKLIIRRDHLL
EGTFNQVMAYSRKELQRNKLYVTFVGEEGLDYSGPSREFFFLLSQELFNPYYGLFEYSANDTYTVQISPM
SAFVENHLEWFRFSGRILGLALIHQYLLDAFFTRPFYKALLRLPCDLSDLEYLDEEFHQSLQWMKDNNIT
DILDLTFTVNEEVFGQVTERELKSGGANTQVTEKNKKEYIERMVKWRVERGVVQQTEALVRGFYEVVDSR
LVSVFDARELELVIAGTAEIDLNDWRNNTEYRGGYHDGHLVIRWFWAAVERFNNEQRLRLLQFVTGTSSV
PYEGFAALRGSNGLRRFCIEKWGKITSLPRAHTCFNRLDLPPYPSYSMLYEKLLTAVEETSTFGLE


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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