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Report for CCDS78206.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
78206.1 Public Homo sapiens 7 INTS15 24 110 108 CCDS HistoryNCBI Gene:79034Re-query CCDS DB by CCDS ID:78206.1Re-query CCDS DB by GeneID:79034See the combined annotation on chromosome 7 in Sequence Viewer

Public since: CCDS release 18, NCBI annotation release 107, Ensembl annotation release 79

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 78206.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000359073.9 ENSP00000351974.5 Accepted alive Link to Ensembl Transcript Viewer:ENST00000359073.9Link to Ensembl Protein Viewer:ENSP00000351974.5Re-query CCDS DB by Nucleotide ID:ENST00000359073Re-query CCDS DB by Protein ID:ENSP00000351974
Original member Current member NCBI NM_001303039.2 NP_001289968.1 Accepted alive Link to Nucleotide Sequence:NM_001303039.2Link to Protein Sequence:NP_001289968.1Re-query CCDS DB by Nucleotide ID:NM_001303039Re-query CCDS DB by Protein ID:NP_001289968Link to BLAST:NP_001289968.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001289968.1 352 Q96N11-2 352 100% 0 0

Chromosomal Locations for CCDS 78206.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 7 (NC_000007.14)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7See the combined annotation on chromosome 7 in Sequence Viewer

Chromosome Start Stop Links
7 6590284 6590475 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6591703 6591867 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6594435 6594600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6599829 6599892 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6600127 6600356 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6602101 6602140 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7
7 6607960 6608161 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 7Link to Ensembl Genome Browser on chromosome 7

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1059 nt):
ATGAGCGACATCCGCCACTCGCTGCTGCGCCGCGATGCGCTGAGCGCCGCCAAGGAGGTGTTGTACCACC
TGGACATCTACTTCAGCAGCCAGCTGCAGAGCGCGCCGCTGCCCATCGTGGACAAGGGCCCCGTGGAGCT
GCTGGAGGAGTTCGTGTTCCAGGTGCCCAAGGAGCGCAGCGCGCAGCCCAAGGAGCAAACCAAGGACTCT
GTTCGGCAGATTATTTTTTCATCCCTTTTCAGCCCTCAAGGGAACAAAGCCGATGACAGCCGGATGAGCT
TGTTGGGAAAACTGGTCTCCATGGCGGTGGCTGTGTGTCGAATCCCGGTGTTGGAGTGTGCTGCCTCCTG
GCTTCAGCGGACGCCCGTGGTTTACTGTGTGAGGTTAGCCAAGGCCCTTGTAGATGACTACTGCTGTTTG
GTGCCGGGATCCATTCAGACGCTGAAGCAGATATTCAGTGCCAGCCCGAGATTCTGCTGCCAGTTCATCA
CCTCCGTTACCGCGCTCTATGACCTGTCATCAGATGACCTCATTCCACCTATGGACTTGCTTGAAATGAT
TGTCACCTGGATTTTTGAGGACCCAAGCGTCCTGCAAGTGCTCATGACGCTGCAGCTGCACCTGACCGAG
AAGAATCTGTATGGGCGCCTGGGGCTGATCCTCTTCGACCACATGGTCCCGCTGGTAGAGGAGATCAACA
GGTTGGCGGATGAACTGAACCCCCTCAACGCCTCCCAGGAGATTGAGCTCTCGCTGGACCGGCTGGCGCA
GGCTCTGCAGGTGGCCATGGCCTCAGGAGCTCTGCTGTGCACGAGAGATGACCTGAGAACCTTGTGCTCC
AGGCTGCCCCATAATAACCTCCTCCAGCTGGTGATCTCGGGTCCCGTGCAGCAGTCGCCTCACGCCGCGC
TCCCCCCGGGGTTCTACCCCCACATCCACACGCCCCCGCTGGGCTACGGGGCTGTCCCGGCCCACCCCGC
CGCCCACCCCGCCCTGCCCACGCATCCCGGCCACACCTTCATCTCCGGCGTGACCTTTCCCTTCAGGCCC
ATCCGCTAG

Translation (352 aa):
MSDIRHSLLRRDALSAAKEVLYHLDIYFSSQLQSAPLPIVDKGPVELLEEFVFQVPKERSAQPKEQTKDS
VRQIIFSSLFSPQGNKADDSRMSLLGKLVSMAVAVCRIPVLECAASWLQRTPVVYCVRLAKALVDDYCCL
VPGSIQTLKQIFSASPRFCCQFITSVTALYDLSSDDLIPPMDLLEMIVTWIFEDPSVLQVLMTLQLHLTE
KNLYGRLGLILFDHMVPLVEEINRLADELNPLNASQEIELSLDRLAQALQVAMASGALLCTRDDLRTLCS
RLPHNNLLQLVISGPVQQSPHAALPPGFYPHIHTPPLGYGAVPAHPAAHPALPTHPGHTFISGVTFPFRP
IR


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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