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Report for CCDS5262.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
5262.1 Public Homo sapiens 6 TAGAP 24 110 108 CCDS HistoryNCBI Gene:117289Re-query CCDS DB by CCDS ID:5262.1Re-query CCDS DB by GeneID:117289See the combined annotation on chromosome 6 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 5262.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000326965.7 ENSP00000322650.6 Accepted alive Link to Ensembl Transcript Viewer:ENST00000326965.7Link to Ensembl Protein Viewer:ENSP00000322650.6Re-query CCDS DB by Nucleotide ID:ENST00000326965Re-query CCDS DB by Protein ID:ENSP00000322650
Original member Current member NCBI NM_152133.3 NP_687034.1 Accepted alive Link to Nucleotide Sequence:NM_152133.3Link to Protein Sequence:NP_687034.1Re-query CCDS DB by Nucleotide ID:NM_152133Re-query CCDS DB by Protein ID:NP_687034Link to BLAST:NP_687034.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_687034.1 553 Q8N103-2 553 100% 0 0

Chromosomal Locations for CCDS 5262.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 6 (NC_000006.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6See the combined annotation on chromosome 6 in Sequence Viewer

Chromosome Start Stop Links
6 159035827 159037124 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159038114 159038228 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159039114 159039309 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6
6 159040723 159040775 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 6Link to Ensembl Genome Browser on chromosome 6

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1662 nt):
ATGGGTGCTCTGGAGATGCAGGACGAGGAGGACAGAATCGAGGCCCTGAAACAGGTTGCAGATAAGCTCC
CCCGGCCCAACCTCCTGCTACTCAAGCACTTGGTCTATGTGCTGCACCTCATCAGCAAGAACTCTGAGGT
GAACAGGATGGACTCCAGCAATCTGGCCATCTGCATTGGACCCAACATGCTCACCCTGGAGAATGACCAG
AGCCTGTCATTTGAAGCCCAGAAGGACCTGAACAACAAGGTGAAGACACTGGTGGAATTCCTCATTGATA
ACTGCTTTGAAATATTTGGGGAGAACATTCCAGTGCATTCCAGTATCACTTCTGATGACTCCCTGGAGCA
CACTGACAGTTCAGATGTGTCGACCCTGCAGAATGACTCAGCCTACGACAGCAACGACCCTGATGTGGAA
TCCAACAGCAGCAGTGGCATCAGCTCTCCCAGCAGGCAGCCCCAGGTGCCCATGGCCACAGCTGCTGGCT
TGGATAGCGCGGGCCCACAGGATGCCCGAGAGGTCAGCCCAGAGCCCATTGTGAGCACCGTGGCCAGGCT
GAAAAGCTCCCTCGCACAGCCCGATAGGAGATACTCAGAGCCCAGCATGCCATCCTCCCAGGAGTGCCTC
GAGAGCCGGGTGACAAACCAAACACTAACAAAGAGTGAAGGGGACTTCCCCGTGCCCCGGGTAGGCTCTC
GTTTGGAAAGTGAGGAGGCTGAAGACCCATTTCCAGAGGAGGTCTTCCCTGCAGTGCAAGGCAAAACCAA
GAGGCCGGTGGACCTGAAGATCAAGAACTTGGCCCCGGGTTCGGTGCTCCCGCGGGCACTGGTTCTCAAA
GCCTTCTCCAGCAGCTCGCTGGACGCGTCCTCTGACAGCTCGCCCGTGGCTTCTCCTTCCAGTCCCAAAA
GAAATTTCTTCAGCAGACATCAGTCTTTCACCACAAAGACAGAGAAAGGCAAGCCCAGCCGAGAAATTAA
AAAGCACTCCATGTCTTTCACCTTTGCCCCTCACAAAAAAGTGCTGACCAAAAACCTCAGCGCGGGCTCT
GGGAAATCGCAAGACTTTACCAGGGACCACGTCCCGAGGGGTGTCAGAAAGGAAAGCCAGCTTGCCGGCC
GAATCGTGCAGGAAAATGGGTGTGAAACCCACAACCAAACAGCCCGCGGCTTCTGCCTGAGACCCCACGC
CCTCTCGGTGGATGATGTGTTCCAGGGAGCTGACTGGGAGAGGCCTGGAAGCCCACCCTCTTATGAAGAG
GCCATGCAGGGCCCGGCAGCCAGACTAGTGGCCTCCGAGAGCCAGACCGTGGGGAGCATGACGGTGGGGA
GCATGAGGGCGAGGATGCTGGAGGCGCACTGCCTCCTACCCCCTCTTCCACCTGCTCACCACGTAGAGGA
CTCAAGACACAGGGGCAGCAAAGAGCCACTCCCTGGCCACGGACTCTCTCCCCTGCCTGAGCGATGGAAA
CAGAGCAGAACTGTCCATGCTTCTGGGGACTCTCTGGGGCACGTGTCTGGCCCAGGGAGACCTGAGCTCC
TCCCGCTGAGGACCGTCTCCGAGTCCGTGCAGAGGAATAAGCGGGACTGTCTCGTGCGACGATGTAGCCA
GCCGGTCTTTGAGGCTGACCAATTCCAATATGCCAAAGAATCGTATATTTAG

Translation (553 aa):
MGALEMQDEEDRIEALKQVADKLPRPNLLLLKHLVYVLHLISKNSEVNRMDSSNLAICIGPNMLTLENDQ
SLSFEAQKDLNNKVKTLVEFLIDNCFEIFGENIPVHSSITSDDSLEHTDSSDVSTLQNDSAYDSNDPDVE
SNSSSGISSPSRQPQVPMATAAGLDSAGPQDAREVSPEPIVSTVARLKSSLAQPDRRYSEPSMPSSQECL
ESRVTNQTLTKSEGDFPVPRVGSRLESEEAEDPFPEEVFPAVQGKTKRPVDLKIKNLAPGSVLPRALVLK
AFSSSSLDASSDSSPVASPSSPKRNFFSRHQSFTTKTEKGKPSREIKKHSMSFTFAPHKKVLTKNLSAGS
GKSQDFTRDHVPRGVRKESQLAGRIVQENGCETHNQTARGFCLRPHALSVDDVFQGADWERPGSPPSYEE
AMQGPAARLVASESQTVGSMTVGSMRARMLEAHCLLPPLPPAHHVEDSRHRGSKEPLPGHGLSPLPERWK
QSRTVHASGDSLGHVSGPGRPELLPLRTVSESVQRNKRDCLVRRCSQPVFEADQFQYAKESYI


Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
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 Genome Browser Links:   Ensembl Genome Browser
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