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Report for CCDS93680.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
93680.1 Public Homo sapiens 4 FAM149A 24 110 108 CCDS HistoryNCBI Gene:25854Re-query CCDS DB by CCDS ID:93680.1Re-query CCDS DB by GeneID:25854See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 93680.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000389354.7 ENSP00000374005.7 Accepted alive Link to Ensembl Transcript Viewer:ENST00000389354.7Link to Ensembl Protein Viewer:ENSP00000374005.7Re-query CCDS DB by Nucleotide ID:ENST00000389354Re-query CCDS DB by Protein ID:ENSP00000374005
Original member Current member NCBI NM_001367768.3 NP_001354697.1 Accepted alive Link to Nucleotide Sequence:NM_001367768.3Link to Protein Sequence:NP_001354697.1Re-query CCDS DB by Nucleotide ID:NM_001367768Re-query CCDS DB by Protein ID:NP_001354697Link to BLAST:NP_001354697.1

Chromosomal Locations for CCDS 93680.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 4 (NC_000004.12)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 186105077 186105642 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186149173 186149283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186149593 186149704 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186151903 186152045 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186153645 186153770 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186154468 186154638 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186156000 186156190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186157565 186157719 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186162845 186162948 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186163424 186163633 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186165344 186165464 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186166968 186167096 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186167184 186167262 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 186171914 186171987 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2292 nt):
ATGAAGGCTGCTGTGCTGGACCTTGGGTCTCTCTTGGCCAAACTCTTCGAGACCTCGACGGCGCCCCCCG
CAGGCCCCTCCTCCAGACCCTCGGGAGGTGCTGCCGCTGCAGGGTCGGGGGGCTCCAGGGCGGGCACCCC
GTTGGGTACCGCCCCGACCCTCCTCCGCGCCCTGGCTCCGGACTCCCCCTCCGCCTCGCGGCGGTCGCCC
GCCCCGCTGCTCTCCTCCCCCTACTCCCGGGGCTCCGCCGCCAGCCGCGCCGCGGGAGCAGTGGGGACCC
TGCTCTCTTGGCCCAGTAGCCCTAGAGCGGGTAAAGCCCCGCCCCAGCCCCCCACTCCCTCCGGCGGGGG
CTGCTCCCCTGCTCGCCTGGTGGTCCCAGCGCGGCCGCCCTCGGGCCCCGGCGGGGTCTGGGCCGCGCTC
CCCAGGAACCCGCTCCAGCCTGGCCCCGGAGAGCGAGAGCTCGGCGCCTGCGTGGCCCCCGGGGCTGGCC
CCAGAACCCTGTTCCTTACGCTGCCTGACATCGGCGAGGAGGGGGCCTCGGACGGCGACTCCGGGGATGG
CGAAGCAAGAGGACTGTCAGAAGGACGTAGAAGGCACGGTTTTACTGTGAGGAGCAAAGATTCTTTACCT
ACGCATTTTACAAGAAATGTGCAGAAAGCCATTGATAAATATACCTGCGGAAGCCATACACCCACGGGAG
CCCACACCTCTTGGTCTGGGTCGGCCACACAGAGCTCTACCACCGGCTCATCCACGGAGAGGGGCTCCGT
TTATTCCTGGAGAGATGACGAATTTGACGAAGCCAGTTCACAGTCAGTGCAGCGGTTACTCTGGGAGGTG
GAGGAAATGTTATTTGAAGGGAAAGTGAACCCTCAGACCCAGAGTCTGCTGGCCGAATGCGGGGAGTGGA
CAAGAAGATCCCTCCATTTGAGAGTATTAGGAAGACAGCTGATCCTGCCCACTGACAAAGGCGTCCAGCA
TTTCCAGGGCAGCACTCCTGCCTCCGCAGTCCACAGACCCCCGCTCAGTGCCTGCGGACACAGCAGCAAC
ATCAGAGAGTTGTGCATTTCTGGCTCTCAAATAGTCCCAGCAGCACTCTCAGCCTCTGCCCTGCCAGGCC
CTGATGACACAGGGGTTGCTGACCTAACGGCACGTTCATCCCTGGAAGAAGAGGTTTACCATGTGGATGG
AAAGATTGAGGAGTATTTCGCTTTTGACAGAAAAGAGGATGATGATGAATGTCTTGAACAAAAACCAGCT
CAGCCCGGTAGGAAATGGCGCAAACTCGGACTTCCTCCTGTTTCCCCGCGTGACTGTGTCAAAGATGCCG
TGGCAGCAGAAGTGTTTGATCACGTCTGGACAAATATGGTAGAACTTTTGGAAGAGCTGATTAGAAAACA
CTGGGAAACTACACTCACAGAAGGGAAAAAACAGAGAGAAACATTGAAAGTGGCTGGAAACAGATTTCCG
CACGTCCTCGTTCCACACGCTCACGCCGATGGAGCCAGTGGCCCCCCGTCCGGACACGCCGAGGCTCACG
GCATCTCCCTGGCTTCTCGTCTGAACCCGCCCCAGATTCATCACTTCTCCAGCAGTTTTTATAGTGACAT
GAATGGTGTCATGACAATTCAAGCAAAACCGCTTCAGCGGAGACCTGCCTATTTTGCTGACAGAACGCAG
AATGAGAAGGAGGACAAAGCATCGGGTGGAGGGGCAGGTGCTCTCTCCTCCGCACCGCACAGACTGGGAC
GGGCCTCAGACACTCATGGATTATCACCTTCTGCAAAGAAAACACCAGTGCCCTGGAGGCTGCCTTCTCT
TGCTTCAGATTCACAGAGACTAAAAACTCCCAACATCTATAGTGACGAAGTTCTTCGGGGAACAAAACTG
CCGACTGGCGTGGACCACATGGCTTCCCCACTGGTTCAAACGTCACGGAGCAGGTTCCCCCCGCTAGTCA
CGGAGACCAGGGGGCAGAATACAGCAGTTCCTGGATGCCGCCTTGTTTCTTACAGAGGAAGGCATCTACA
AAACCGTGTGTTGAGTGCCATGCCTGACGGTACAGAACGATCGCGTCTTCGAGAAAGAACAGCCACCCTG
GAACGGTTGTCAAGGCCCAGCACAACCCACACGTTCCGGTCGGATACGCCTCGAAAAAGTTCATTGACAC
AAATGGAATTTGCTGCTCACACATGGACAGGTCAAAGTATTTTGACAGGTTCACAATATGTGCCTAAATC
TTTTCAGAGGACAACTTTGACTTTCAAGAGGAGATTCCAAGTGACATCTTGA

Translation (763 aa):
MKAAVLDLGSLLAKLFETSTAPPAGPSSRPSGGAAAAGSGGSRAGTPLGTAPTLLRALAPDSPSASRRSP
APLLSSPYSRGSAASRAAGAVGTLLSWPSSPRAGKAPPQPPTPSGGGCSPARLVVPARPPSGPGGVWAAL
PRNPLQPGPGERELGACVAPGAGPRTLFLTLPDIGEEGASDGDSGDGEARGLSEGRRRHGFTVRSKDSLP
THFTRNVQKAIDKYTCGSHTPTGAHTSWSGSATQSSTTGSSTERGSVYSWRDDEFDEASSQSVQRLLWEV
EEMLFEGKVNPQTQSLLAECGEWTRRSLHLRVLGRQLILPTDKGVQHFQGSTPASAVHRPPLSACGHSSN
IRELCISGSQIVPAALSASALPGPDDTGVADLTARSSLEEEVYHVDGKIEEYFAFDRKEDDDECLEQKPA
QPGRKWRKLGLPPVSPRDCVKDAVAAEVFDHVWTNMVELLEELIRKHWETTLTEGKKQRETLKVAGNRFP
HVLVPHAHADGASGPPSGHAEAHGISLASRLNPPQIHHFSSSFYSDMNGVMTIQAKPLQRRPAYFADRTQ
NEKEDKASGGGAGALSSAPHRLGRASDTHGLSPSAKKTPVPWRLPSLASDSQRLKTPNIYSDEVLRGTKL
PTGVDHMASPLVQTSRSRFPPLVTETRGQNTAVPGCRLVSYRGRHLQNRVLSAMPDGTERSRLRERTATL
ERLSRPSTTHTFRSDTPRKSSLTQMEFAAHTWTGQSILTGSQYVPKSFQRTTLTFKRRFQVTS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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