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Report for CCDS74808.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74808.1 Public Homo sapiens 22 POTEH 24 110 108 CCDS HistoryNCBI Gene:23784Re-query CCDS DB by CCDS ID:74808.1Re-query CCDS DB by GeneID:23784See the combined annotation on chromosome 22 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)


Attributes
Inferred exon combination

Sequence IDs included in CCDS 74808.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000343518.11 ENSP00000340610.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000343518.11Link to Ensembl Protein Viewer:ENSP00000340610.6Re-query CCDS DB by Nucleotide ID:ENST00000343518Re-query CCDS DB by Protein ID:ENSP00000340610
Original member Current member NCBI NM_001136213.1 NP_001129685.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001136213.1Link to Protein Sequence:NP_001129685.1Re-query CCDS DB by Nucleotide ID:NM_001136213Re-query CCDS DB by Protein ID:NP_001129685Link to BLAST:NP_001129685.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001129685.1 545 Q6S545-1 545 100% 0 0

Chromosomal Locations for CCDS 74808.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 22 (NC_000022.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22See the combined annotation on chromosome 22 in Sequence Viewer

Chromosome Start Stop Links
22 15690078 15690709 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15695371 15695485 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15695645 15695818 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15698662 15698768 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15700078 15700215 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15702686 15702756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15708020 15708090 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15709782 15709826 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15710868 15711034 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22
22 15719660 15719777 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 22Link to Ensembl Genome Browser on chromosome 22

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1638 nt):
ATGGTGGCTGAGGCTGGTTCAATGCCGGCTGCCTCCTCTGTGAAGAAGCCATTTGGTCTCAGAAGCAAGA
TGGGCAAGTGGTGCCGCCACTGCTTCGCCTGGTGCAGGGGGAGCGGCAAGAGCAACGTGGGCACTTCTGG
AGACCACGACGATTCTGCTATGAAGACACTCAGGAGCAAGATGGGCAAGTGGTGCTGCCACTGCTTCCCC
TGGTGCAGGGGGAGCGGCAAGAGCAACGTGGGCACTTCTGGAGACCACGACGATTCTGCTATGAAGACAC
TCAGGAGCAAGATGGGCAAGTGGTGCTGCCACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAGCAACGT
GGGCACTTCTGGAGACCACGACGACTCTGCTATGAAGACACTCAGGAGCAAGATGGGCAAGTGGTGCTGC
CACTGCTTCCCCTGCTGCAGGGGGAGCGGCAAGAACAAAGTGGGCCCTTGGGGAGACTACGACGACAGCG
CTTTCATGGAGCCGAGGTACCACGTCCGTCGAGAAGATCTGGACAAGCTCCACAGAGCTGCCTGGTGGGG
TAAAGTCCCCAGAAAGGATCTCATCGTCATGCTCAAGGACACTGACATGAACAAGAAGGACAAGCAAAAG
AGGACTGCTCTACATCTGGCCTCTGCCAATGGAAATTCAGAAGTAGTAAAACTCCTGCTGGACAGACGAT
GTCAACTTAATATCCTTGACAACAAAAAGAGGACAGCTCTGACAAAGGCCGTACAATGCCAGGAAGATGA
ATGTGCGTTAATGTTGCTGGAACATGGCACTGATCCGAATATTCCAGATGAGTATGGAAATACCGCTCTA
CACTATGCTATCTACAATGAAGATAAATTAATGGCCAAAGCACTGCTCTTATACGGTGCTGATATCGAAT
CAAAAAACAAGCATGGCCTCACACCACTGTTACTTGGTGTACATGAGCAAAAACAGCAAGTGGTGAAATT
TTTAATCAAGAAAAAAGCAAATTTAAATGCACTGGATAGATATGGAAGAACTGCTCTCATACTTGCTGTA
TGTTGTGGATCGGCAAGTATAGTCAGCCTTCTACTTGAGCAAAACATTGATGTATCTTCTCAAGATCTAT
CTGGACAGACGGCCAGAGAGTATGCTGTTTCTAGTCGTCATAATGTAATTTGCCAGTTACTTTCTGACTA
CAAAGAAAAACAGATACTAAAAGTCTCTTCTGAAAACAGCAATCCAGAACAAGACTTAAAGCTGACATCA
GAGGAAGAGTCACAAAGGCTTAAAGGAAGTGAAAATAGCCAGCCAGAGGAAATGTCTCAAGAACCAGAAA
TAAATAAGGGTGGTGATAGAAAGGTTGAAGAAGAAATGAAGAAGCACGGAAGTACTCATATGGGATTCCC
AGAAAACCTGACTAACGGTGCCACTGCTGACAATGGTGATGATGGATTAATTCCACCAAGGAAAAGCAGA
ACACCTGAAAGCCAGCAATTTCCTGACACTGAGAATGAACAGTATCACAGTGATGAACAAAATGATACTC
AGAAGCAACTTTCTGAAGAACAGAACACTGGAATATTACAAGATGAGATTCTGATTCATGAAGAAAAGCA
GATAGAAGTGGCTGAAAATGAATTCTGA

Translation (545 aa):
MVAEAGSMPAASSVKKPFGLRSKMGKWCRHCFAWCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCCHCFP
WCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCCHCFPCCRGSGKSNVGTSGDHDDSAMKTLRSKMGKWCC
HCFPCCRGSGKNKVGPWGDYDDSAFMEPRYHVRREDLDKLHRAAWWGKVPRKDLIVMLKDTDMNKKDKQK
RTALHLASANGNSEVVKLLLDRRCQLNILDNKKRTALTKAVQCQEDECALMLLEHGTDPNIPDEYGNTAL
HYAIYNEDKLMAKALLLYGADIESKNKHGLTPLLLGVHEQKQQVVKFLIKKKANLNALDRYGRTALILAV
CCGSASIVSLLLEQNIDVSSQDLSGQTAREYAVSSRHNVICQLLSDYKEKQILKVSSENSNPEQDLKLTS
EEESQRLKGSENSQPEEMSQEPEINKGGDRKVEEEMKKHGSTHMGFPENLTNGATADNGDDGLIPPRKSR
TPESQQFPDTENEQYHSDEQNDTQKQLSEEQNTGILQDEILIHEEKQIEVAENEF


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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