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Report for CCDS33127.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
33127.1 Public Homo sapiens 19 ZNF264 24 110 108 CCDS HistoryNCBI Gene:9422Re-query CCDS DB by CCDS ID:33127.1Re-query CCDS DB by GeneID:9422See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 3, NCBI annotation release 36.2, Ensembl annotation release 41

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 33127.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000263095.10 ENSP00000263095.5 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000263095.10Link to Ensembl Protein Viewer:ENSP00000263095.5Re-query CCDS DB by Nucleotide ID:ENST00000263095Re-query CCDS DB by Protein ID:ENSP00000263095
Original member Current member EBI ENST00000536056.1 ENSP00000440376.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000536056.1Link to Ensembl Protein Viewer:ENSP00000440376.1Re-query CCDS DB by Nucleotide ID:ENST00000536056Re-query CCDS DB by Protein ID:ENSP00000440376
Original member Current member NCBI NM_003417.5 NP_003408.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003417.5Link to Protein Sequence:NP_003408.1Re-query CCDS DB by Nucleotide ID:NM_003417Re-query CCDS DB by Protein ID:NP_003408Link to BLAST:NP_003408.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003408.1 627 O43296 627 100% 0 0

Chromosomal Locations for CCDS 33127.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 57191914 57191946 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57193875 57194001 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57205397 57205492 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 57211354 57212981 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1884 nt):
ATGGCGGCAGCGGTGCTGACGGACCGGGCCCAGGTGTCTGTGACCTTTGATGATGTGGCTGTGACTTTCA
CCAAGGAGGAGTGGGGGCAGCTGGACCTAGCTCAGCGGACCCTGTACCAGGAGGTGATGCTGGAAAACTG
TGGGCTCCTGGTGTCTCTGGGGTGTCCTGTTCCCAAAGCTGAGCTGATCTGCCACCTAGAGCATGGGCAG
GAGCCATGGACCAGGAAGGAAGACCTCTCCCAAGACACCTGTCCAGGCGACAAAGGAAAACCTAAGACCA
CAGAACCTACCACTTGTGAGCCAGCCTTGTCAGAGGGAATCTCACTTCAGGGACAAGTGACACAAGGAAA
CTCAGTGGACTCACAGTTGGGGCAAGCCGAGGATCAGGATGGGCTATCAGAAATGCAGGAAGGACACTTC
AGACCAGGAATAGATCCCCAGGAGAAGTCTCCTGGGAAGATGAGCCCTGAATGTGATGGTTTAGGGACAG
CTGATGGTGTGTGTTCAAGGATTGGACAGGAGCAAGTCTCTCCAGGAGATAGAGTCCGTAGCCATAACTC
ATGTGAGTCAGGTAAAGATCCCATGATTCAGGAAGAGGAAAATAACTTTAAATGCAGTGAATGTGGAAAA
GTATTTAACAAGAAACACCTCCTTGCTGGACATGAGAAAATTCACTCTGGAGTTAAGCCCTATGAATGCA
CAGAATGTGGGAAAACCTTTATTAAGAGCACACATCTCCTGCAACATCACATGATCCACACTGGGGAGAG
GCCCTATGAGTGCATGGAGTGTGGAAAGGCCTTCAACCGCAAGTCATACCTTACCCAGCACCAGCGGATT
CACAGTGGAGAGAAGCCTTACAAGTGCAATGAATGCGGAAAGGCCTTCACCCACCGCTCCAATTTTGTCT
TGCATAACAGGAGACACACTGGAGAAAAATCCTTTGTGTGCACAGAATGTGGCCAAGTCTTTCGACATAG
GCCAGGCTTTCTCCGGCACTATGTTGTCCACAGTGGTGAGAATCCCTATGAGTGCTTGGAGTGTGGCAAG
GTCTTCAAACACAGGTCATATCTCATGTGGCACCAGCAGACTCATACCGGGGAGAAGCCCTATGAGTGCA
GTGAATGTGGGAAGGTCTTCTTGGAGAGTGCAGCCCTGATTCACCACTATGTCATCCACACTGGAGAGAA
GCCCTTTGAGTGCCTCGAGTGTGGGAAGGCTTTCAACCACCGATCCTACCTCAAGAGGCACCAGCGGATT
CACACTGGGGAGAAGCCCTTCGTGTGCAGTGAATGTGGAAAGGCCTTCACCCACTGCTCTACTTTTATCT
TGCATAAAAGGGCCCACACTGGAGAAAAGCCTTTCGAGTGCAAAGAGTGTGGGAAAGCCTTTAGCAATCG
GAAGGACCTCATTCGCCACTTCAGCATCCACACTGGAGAGAAGCCCTATGAGTGCGTGGAGTGTGGAAAG
GCCTTCACCCGCATGTCGGGCCTCACGAGGCACAAGCGGATTCATAGTGGAGAGAAGCCCTATGAATGTG
TTGAGTGTGGGAAATCGTTTTGCTGGAGCACAAACCTCATTCGACATGCCATTATCCACACTGGAGAGAA
GCCCTATAAATGTAGTGAATGTGGAAAGGCCTTCAGTCGCAGCTCGTCCCTCACTCAGCATCAAAGGATG
CATACTGGGAAAAATCCCATCAGTGTAACAGATGTGGGAAGACCTTTTACAAGTGGACAAACCTCAGTTA
CCCTTCGAGAACTTCTTTTAGGGAAGGACTTTTTGAATGTAACCACTGAGGCAAATATTTTGCCAGAGGA
AACATCTTCCTCTGCATCTGATCAACCATACCAAAGAGAAACCCCACAAGTGTCTTCACTGTGA

Translation (627 aa):
MAAAVLTDRAQVSVTFDDVAVTFTKEEWGQLDLAQRTLYQEVMLENCGLLVSLGCPVPKAELICHLEHGQ
EPWTRKEDLSQDTCPGDKGKPKTTEPTTCEPALSEGISLQGQVTQGNSVDSQLGQAEDQDGLSEMQEGHF
RPGIDPQEKSPGKMSPECDGLGTADGVCSRIGQEQVSPGDRVRSHNSCESGKDPMIQEEENNFKCSECGK
VFNKKHLLAGHEKIHSGVKPYECTECGKTFIKSTHLLQHHMIHTGERPYECMECGKAFNRKSYLTQHQRI
HSGEKPYKCNECGKAFTHRSNFVLHNRRHTGEKSFVCTECGQVFRHRPGFLRHYVVHSGENPYECLECGK
VFKHRSYLMWHQQTHTGEKPYECSECGKVFLESAALIHHYVIHTGEKPFECLECGKAFNHRSYLKRHQRI
HTGEKPFVCSECGKAFTHCSTFILHKRAHTGEKPFECKECGKAFSNRKDLIRHFSIHTGEKPYECVECGK
AFTRMSGLTRHKRIHSGEKPYECVECGKSFCWSTNLIRHAIIHTGEKPYKCSECGKAFSRSSSLTQHQRM
HTGKNPISVTDVGRPFTSGQTSVTLRELLLGKDFLNVTTEANILPEETSSSASDQPYQRETPQVSSL


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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