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Report for CCDS12637.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
12637.1 Public Homo sapiens 19 ZNF112 24 110 108 CCDS HistoryNCBI Gene:7771Re-query CCDS DB by CCDS ID:12637.1Re-query CCDS DB by GeneID:7771See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 12637.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000354340.9 ENSP00000346305.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000354340.9Link to Ensembl Protein Viewer:ENSP00000346305.3Re-query CCDS DB by Nucleotide ID:ENST00000354340Re-query CCDS DB by Protein ID:ENSP00000346305
Original member Current member NCBI NM_001348282.2 NP_001335211.1 Accepted alive Link to Nucleotide Sequence:NM_001348282.2Link to Protein Sequence:NP_001335211.1Re-query CCDS DB by Nucleotide ID:NM_001348282Re-query CCDS DB by Protein ID:NP_001335211Link to BLAST:NP_001335211.1
Original member Current member NCBI NM_001348283.1 NP_001335212.1 Accepted alive Link to Nucleotide Sequence:NM_001348283.1Link to Protein Sequence:NP_001335212.1Re-query CCDS DB by Nucleotide ID:NM_001348283Re-query CCDS DB by Protein ID:NP_001335212Link to BLAST:NP_001335212.1
Original member Current member NCBI NM_013380.4 NP_037512.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_013380.4Link to Protein Sequence:NP_037512.3Re-query CCDS DB by Nucleotide ID:NM_013380Re-query CCDS DB by Protein ID:NP_037512Link to BLAST:NP_037512.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001335211.1 907 Q9UJU3-2 907 100% 0 0
NP_001335212.1 907 Q9UJU3-2 907 100% 0 0
NP_037512.3 907 Q9UJU3-2 907 100% 0 0

Chromosomal Locations for CCDS 12637.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 44327433 44329936 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44336623 44336718 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 44340416 44340539 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2724 nt):
ATGGTGACATTCAAGGATGTTGCTGTGGTCTTCACTGAGGAGGAGCTGGGGCTGCTGGACTCTGTCCAGA
GGAAGCTGTACCGAGATGTGATGCTGGAGAACTTCAGGAACCTGCTCTTAGTAGCACATCAGCCCTTCAA
GCCAGACCTAATATCCCAGCTGGAGAGAGAAGAAAAGCTTTTGATGGTGGAGACAGAAACCCCAAGAGAT
GGATGTTCAGGAAGGAAGAATCAACAAAAGATGGAGAGTATTCAGGAAGTAACAGTAAGCTACTTTTCCC
CCAAAGAGCTTTCCTCCCGTCAGACCTGGCAACAAAGTGCAGGTGGGTTAATCAGGTGTCAAGATTTCCT
GAAAGTTTTTCAAGGGAAGAATTCTCAGTTGCAAGAACAAGGTAATTCCCTCGGCCAGGTTTGGGCAGGA
ATACCAGTTCAGATTTCTGAAGATAAGAACTATATATTCACTCATATAGGGAATGGCTCCAATTATATAA
AAAGTCAAGGGTATCCATCTTGGAGGGCACATCATTCTTGGAGGAAAATGTATCTGAAAGAGTCACATAA
TTATCAGTGTAGATGTCAGCAAATTTCCATGAAAAATCATTTCTGTAAGTGTGACAGTGTCAGTTGGCTC
TCACATCACAATGATAAACTGGAAGTACACAGAAAAGAAAACTACAGCTGCCATGACTGTGGAGAAGATA
TCATGAAGGTATCATTACTTAATCAGGAGTCAATTCAAACAGAGGAGAAGCCCTATCCATGTACTGGGTA
TAGAAAAGCCTTCAGTAATGACTCCAGCTCTGAGGTTCATCAGCAGTTCCACTTGGAAGGGAAGCCCTAT
ACATACAGTTCATGTGGAAAGGGCTGTAATTATAGTTCACTTCTTCATATTCATCAAAATATTGAGAGAG
AAGATGATATTGAGAATTCACATCTGAAATCCTATCAGAGAGTGCATACAGAGGAGAAACCATGCAAATG
TGGTGAATATGGTGAGAACTTCAATCACTGTTCCCCTCTTAACACTTATGAACTTATCCACACAGGTGAG
ATGTCCTATAGGCACAACATTTATGAGAAAGCCTTCAGTCATAGCTTAGACCTTAATAGTATTTTTAGGG
TCCATACTAGGGATGAACCCCATGAATATGAGGAAAATGAGAATGTCTTTAATCAGAGTTCATGTCTTCA
AGTCCATCAAAAAATCCACACTGAAGAGAAACTATACACAGATATAGAGTATGGAAAGAGTTTCATTTGT
AGTTCAAATCTTGACATTCAGCATAGGGTTCATATGGAAGAGAATTCATATAATTCTGAGGAGTGTGGTA
ATGGCTTCAGTCTGGCCTCACATTTTCAGGACCTTCAGATAGTCCACACTAAGGAACAACCATATAAACG
CTATGTGTGTAGTAACAGCTTCAGCCATAATTTATATCTTCAAGGTCATCCAAAAATTCACATTGGAGAG
AAACCACGTAAGGAGCATGGGAATGGCTTCAACTGGAGCTCAAAACTTAAAGATCATCAGAGAGTCCACA
CTGGACAGAAGCCATACAAATGCAATATATGCGGCAAAGGTTTCAATCATAGATCAGTTCTGAATGTTCA
TCAGAGAGTCCACACAGGAGAGAAACCTTATAAATGCGAGGAATGTGATAAGGGATTCAGTCGGAGTTCA
TATCTTCAAGCCCATCAGAGAGTCCACACTGGAGAAAAACCTTATAAATGTGAGGAATGTGGGAAGGGGT
TCAGTCGAAATTCATACCTTCAAGGCCATCAGAGAGTTCACACTGGAGAAAAACCATACAAGTGTGAGGA
GTGTGGGAAGGGCTTCAGTCGGAGTTCACACCTTCAAGGCCATCAGAGAGTCCACACTGGAGAAAAACCA
TTCAAATGTGAGGAATGTGGGAAGGGGTTCAGTTGGAGCTTTAATCTTCAAATTCATCAGAGGGTTCACA
CAGGAGAAAAACCCTATAAATGTGAAGAATGTGGTAAAGGCTTCAGTAAGGCCTCAACACTTTTGGCCCA
TCAGAGGGTCCACACGGGAGAGAAGCCATACCAATGTGATGAGTGTGGTAAGAGTTTCAGTCAGAGATCA
TACCTTCAGAGTCATCAGAGTGTCCATTCTGGAGAAAGACCATATATATGTGAGGTATGTGGAAAGGGCT
TCAGTCAGAGAGCATATCTTCAAGGTCATCAGAGAGTCCACACTAGAGTGAAACCGTATAAATGTGAGAT
GTGTGGGAAGGGCTTTAGTCAGAGTTCGCGCCTTGAAGCACATCGGAGGGTTCACACAGGAGGGAAACCA
TACAAATGTGAGGTGTGTACAAAGGGTTTCAGTGAGAGTTCACGCCTTCAAGCACACCAAAGGGTTCATG
TGGAAGGGAGACCCTATAAATGTGAACAGTGTGGTAAGGGTTTCAGTGGGTATTCAAGTCTTCAAGCCCA
TCACAGAGTCCACACAGGAGAGAAACCATACAAATGTGAGGTATGTGGAAAGGGCTTCAGTCAGAGATCA
AATCTTCAGGCTCACCAGAGAGTCCACACAGGAGAGAAACCATACAAATGTGATGCATGTGGTAAGGGTT
TCCGTTGGAGCTCAGGTCTTCTCATTCATCAAAGAGTCCATAGTAGTGATAAATTCTATAAAAGCGAAGA
CTATGGTAAGGACTACCCTTCATCAGAGAATCTACACAGAAATGAAGATTCTGTTTTGTTTTGA

Translation (907 aa):
MVTFKDVAVVFTEEELGLLDSVQRKLYRDVMLENFRNLLLVAHQPFKPDLISQLEREEKLLMVETETPRD
GCSGRKNQQKMESIQEVTVSYFSPKELSSRQTWQQSAGGLIRCQDFLKVFQGKNSQLQEQGNSLGQVWAG
IPVQISEDKNYIFTHIGNGSNYIKSQGYPSWRAHHSWRKMYLKESHNYQCRCQQISMKNHFCKCDSVSWL
SHHNDKLEVHRKENYSCHDCGEDIMKVSLLNQESIQTEEKPYPCTGYRKAFSNDSSSEVHQQFHLEGKPY
TYSSCGKGCNYSSLLHIHQNIEREDDIENSHLKSYQRVHTEEKPCKCGEYGENFNHCSPLNTYELIHTGE
MSYRHNIYEKAFSHSLDLNSIFRVHTRDEPHEYEENENVFNQSSCLQVHQKIHTEEKLYTDIEYGKSFIC
SSNLDIQHRVHMEENSYNSEECGNGFSLASHFQDLQIVHTKEQPYKRYVCSNSFSHNLYLQGHPKIHIGE
KPRKEHGNGFNWSSKLKDHQRVHTGQKPYKCNICGKGFNHRSVLNVHQRVHTGEKPYKCEECDKGFSRSS
YLQAHQRVHTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGEKP
FKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQCDECGKSFSQRS
YLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMCGKGFSQSSRLEAHRRVHTGGKP
YKCEVCTKGFSESSRLQAHQRVHVEGRPYKCEQCGKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRS
NLQAHQRVHTGEKPYKCDACGKGFRWSSGLLIHQRVHSSDKFYKSEDYGKDYPSSENLHRNEDSVLF


Links Key
 Links to:   History report
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  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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