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Report for CCDS42541.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
42541.1 Public Homo sapiens 19 ZNF91 24 110 108 CCDS HistoryNCBI Gene:7644Re-query CCDS DB by CCDS ID:42541.1Re-query CCDS DB by GeneID:7644See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 5, NCBI annotation release 36.3, Ensembl annotation release 47

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 42541.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000300619.12 ENSP00000300619.6 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000300619.12Link to Ensembl Protein Viewer:ENSP00000300619.6Re-query CCDS DB by Nucleotide ID:ENST00000300619Re-query CCDS DB by Protein ID:ENSP00000300619
Original member Current member NCBI NM_003430.4 NP_003421.2 MANE Select Accepted alive Link to Nucleotide Sequence:NM_003430.4Link to Protein Sequence:NP_003421.2Re-query CCDS DB by Nucleotide ID:NM_003430Re-query CCDS DB by Protein ID:NP_003421Link to BLAST:NP_003421.2

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_003421.2 1191 Q05481-1 1191 100% 0 0

Chromosomal Locations for CCDS 42541.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 23359403 23362725 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23373742 23373837 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23374638 23374764 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 23395325 23395354 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (3576 nt):
ATGCCAGGAACCCCTGGAAGCCTAGAAATGGGACTGTTGACATTTAGGGATGTGGCCATAGAATTCTCTC
CGGAGGAGTGGCAATGTCTGGACACTGCACAGCAGAATTTATATAGGAATGTGATGTTAGAGAACTACAG
AAACCTGGCCTTCCTGGGTATTGCTCTCTCTAAGCCAGACCTGATTACTTATCTGGAGCAAGGAAAAGAG
CCCTGGAATATGAAGCAACATGAGATGGTGGATGAACCCACAGGTATATGTCCTCATTTTCCTCAAGACT
TTTGGCCAGAGCAGAGCATGGAAGATTCTTTTCAAAAAGTATTACTGAGAAAATATGAAAAATGTGGACA
TGAGAATTTACAGTTAAGAAAAGGTTGTAAAAGTGTGGATGAGTGTAAGGTGCACAAAGAAGGTTATAAT
AAACTTAACCAGTGTCTCACAACTGCCCAGAGCAAAGTATTTCAATGTGGGAAATATTTGAAAGTCTTCT
ATAAATTTTTAAATTCAAACAGACATACGATAAGACATACTGGAAAGAAATGCTTCAAATGTAAAAAATG
TGTCAAGTCATTTTGCATCCGTTTACACAAAACCCAACATAAATGCGTTTATATTACAGAGAAGTCCTGT
AAATGTAAAGAATGTGAAAAAACCTTTCATTGGTCCTCAACCCTTACTAATCATAAGGAAATTCATACTG
AAGATAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAAGCAGCTCTCAACCCTTACTACACATAA
AATAATCTGTGCTAAAGAGAAAATCTACAAGTGTGAAGAATGTGGCAAAGCATTTCTATGGTCCTCAACC
CTAACTAGACATAAGAGGATACACACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTA
GCCATTCTTCAACCCTTGCTAAACATAAGAGAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATG
TGGCAAAGCTTTTAGCCGTTCTTCAACCCTTGCTAAACATAAGAGAATTCATACTGGAGAGAAACCCTAC
AAATGTAAAGAATGTGGCAAAGCTTTTAGCAATTCCTCAACCCTTGCTAATCATAAGATAACTCATACTG
AAGAGAAACCCTACAAATGTAAAGAATGTGACAAAGCTTTTAAGCGACTCTCAACCCTTACTAAACATAA
AATAATACATGCTGGAGAGAAACTCTACAAATGTGAAGAATGTGGCAAAGCTTTTAATCGATCTTCAAAT
CTTACTATACATAAGTTTATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATGTGGCAAAGCATTTA
ACTGGTCCTCAAGCCTTACTAAACATAAAAGATTTCATACTAGAGAGAAACCCTTCAAATGTAAAGAATG
TGGCAAAGCATTTATATGGTCTTCAACCCTAACTAGACATAAGAGGATACACACTGGAGAGAAGCCCTAC
AAATGTGAAGAATGTGGCAAAGCTTTTAGGCAATCCTCAACCCTTACTAAACATAAGATAATTCATACTG
GAGAGAAACCCTACAAATTTGAAGAATGTGGCAAAGCTTTTAGACAATCCTTAACCCTTAATAAACATAA
GATAATTCATAGTAGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAGCAATTCTCAACC
CTTACTACACATAAAATAATTCATGCTGGAAAGAAACTCTACAAATGTGAAGAATGTGGCAAAGCTTTTA
ATCATTCCTCAAGTCTTTCTACACATAAGATAATTCATACTGGAGAGAAGTCTTACAAGTGTGAAGAATG
TGGCAAAGCATTTCTATGGTCCTCAACCCTAAGAAGACATAAGAGGATACACACTGGAGAGAAACCCTAC
AAATGTGAAGAATGTGGCAAAGCTTTTAGCCATTCTTCAGCCCTTGCTAAACATAAGAGAATTCATACTG
GAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAGCAATTCCTCAACCCTTGCTAATCATAA
GATAACTCATACTGAAGAGAAACCCTACAAATGTAAAGAATGTGACAAAACTTTTAAGCGACTCTCAACC
CTTACTAAACATAAAATAATACATGCTGGAGAGAAACTCTACAAATGTGAAGAATGTGGCAAAGCTTTTA
ATCGATCTTCAAATCTTACTATACATAAGTTTATTCATACTGGAGAGAAACCTTACAAGTGTGAAGAATG
TGGCAAAGCATTTAACTGGTCCTCAAGCCTTACTAAACATAAAAGAATTCATACTAGAGAGAAACCCTTC
AAATGTAAAGAATGTGGCAAAGCATTTATATGGTCTTCAACCCTAACTAGACATAAGAGGATACACACTG
GAGAGAAGCCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCGTTCCTCAACCCTTACTAAGCATAA
GACAATTCATACTGGAGAGAAACCCTACAAATGTAAAGAATGTGGCAAAGCTTTTAAGCACTCCTCAGCC
CTTGCTAAACATAAAATAATACATGCTGGAGAGAAACTCTACAAATGTGAGGAATGTGGCAAAGCTTTTA
ATCAATCTTCAAATCTTACGACACATAAGATAATTCATACTAAAGAGAAACCTTCCAAGAGTGAAGAATG
TGACAAAGCATTTATCTGGTCCTCAACCCTTACTGAACATAAGAGAATTCATACCAGAGAGAAAACCTAC
AAATGTGAAGAATGTGGCAAAGCATTTAGCCAGCCTTCACACCTTACTACACATAAGAGGATGCACACTG
GAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGCCAATCCTCAACCCTTACTACACATAA
GATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCTTTTAGGAAATCTTCAACT
CTTACTGAACATAAGATAATTCATACTGGAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTA
GCCAATCCTCAACCCTAACTAGACATACGAGGATGCACACTGGAGAGAAACCATACAAATGTGAAGAATG
TGGCAAAGCTTTTAATCGATCCTCAAAGCTTACTACACATAAGATAATTCATACTGGAGAGAAACCTTAC
AAGTGTGAAGAATGTGGCAAAGCATTTATATCATCCTCAACCCTAAATGGACATAAGAGAATTCATACTA
GAGAGAAACCCTACAAATGTGAAGAATGTGGCAAAGCATTTAGCCAATCTTCAACCCTAACTAGACATAA
GAGGTTGCACACCGGAGAGAAACCCTACAAATGTGGAGAATGTGGCAAAGCCTTTAAAGAGTCCTCAGCT
CTTACTAAACATAAGATAATTCACACTGGAGAGAAACCCTACAAATGTGAAAAATGTGGCAAAGCCTTTA
ACCAGTCTTCAATCCTTACTAACCATAAGAAAATTCATACTATCACACCTGTAATCCCACTACTTTGGGA
GGCCGAGGCGGGCGGATCACGAGGTCAGGAGATGGAGACCATCCTGGCTAACACAGTGAAACCCCTTCTC
TACTAA

Translation (1191 aa):
MPGTPGSLEMGLLTFRDVAIEFSPEEWQCLDTAQQNLYRNVMLENYRNLAFLGIALSKPDLITYLEQGKE
PWNMKQHEMVDEPTGICPHFPQDFWPEQSMEDSFQKVLLRKYEKCGHENLQLRKGCKSVDECKVHKEGYN
KLNQCLTTAQSKVFQCGKYLKVFYKFLNSNRHTIRHTGKKCFKCKKCVKSFCIRLHKTQHKCVYITEKSC
KCKECEKTFHWSSTLTNHKEIHTEDKPYKCEECGKAFKQLSTLTTHKIICAKEKIYKCEECGKAFLWSST
LTRHKRIHTGEKPYKCEECGKAFSHSSTLAKHKRIHTGEKPYKCEECGKAFSRSSTLAKHKRIHTGEKPY
KCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKAFKRLSTLTKHKIIHAGEKLYKCEECGKAFNRSSN
LTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRFHTREKPFKCKECGKAFIWSSTLTRHKRIHTGEKPY
KCEECGKAFRQSSTLTKHKIIHTGEKPYKFEECGKAFRQSLTLNKHKIIHSREKPYKCKECGKAFKQFST
LTTHKIIHAGKKLYKCEECGKAFNHSSSLSTHKIIHTGEKSYKCEECGKAFLWSSTLRRHKRIHTGEKPY
KCEECGKAFSHSSALAKHKRIHTGEKPYKCKECGKAFSNSSTLANHKITHTEEKPYKCKECDKTFKRLST
LTKHKIIHAGEKLYKCEECGKAFNRSSNLTIHKFIHTGEKPYKCEECGKAFNWSSSLTKHKRIHTREKPF
KCKECGKAFIWSSTLTRHKRIHTGEKPYKCEECGKAFSRSSTLTKHKTIHTGEKPYKCKECGKAFKHSSA
LAKHKIIHAGEKLYKCEECGKAFNQSSNLTTHKIIHTKEKPSKSEECDKAFIWSSTLTEHKRIHTREKTY
KCEECGKAFSQPSHLTTHKRMHTGEKPYKCEECGKAFSQSSTLTTHKIIHTGEKPYKCEECGKAFRKSST
LTEHKIIHTGEKPYKCEECGKAFSQSSTLTRHTRMHTGEKPYKCEECGKAFNRSSKLTTHKIIHTGEKPY
KCEECGKAFISSSTLNGHKRIHTREKPYKCEECGKAFSQSSTLTRHKRLHTGEKPYKCGECGKAFKESSA
LTKHKIIHTGEKPYKCEKCGKAFNQSSILTNHKKIHTITPVIPLLWEAEAGGSRGQEMETILANTVKPLL
Y


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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