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Report for CCDS74298.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
74298.1 Public Homo sapiens 19 ZNF333 24 110 108 CCDS HistoryNCBI Gene:84449Re-query CCDS DB by CCDS ID:74298.1Re-query CCDS DB by GeneID:84449See the combined annotation on chromosome 19 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 74298.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000540689.6 ENSP00000438130.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000540689.6Link to Ensembl Protein Viewer:ENSP00000438130.1Re-query CCDS DB by Nucleotide ID:ENST00000540689Re-query CCDS DB by Protein ID:ENSP00000438130
Original member Current member NCBI NM_001300912.2 NP_001287841.1 Accepted alive Link to Nucleotide Sequence:NM_001300912.2Link to Protein Sequence:NP_001287841.1Re-query CCDS DB by Nucleotide ID:NM_001300912Re-query CCDS DB by Protein ID:NP_001287841Link to BLAST:NP_001287841.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001287841.1 303 Q96JL9-3 303 100% 0 0

Chromosomal Locations for CCDS 74298.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 19 (NC_000019.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19See the combined annotation on chromosome 19 in Sequence Viewer

Chromosome Start Stop Links
19 14693492 14693494 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14695010 14695133 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14695566 14695661 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14699199 14699281 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14705054 14705170 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14706686 14706773 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14715382 14715470 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14716112 14716238 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14716994 14717089 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14717657 14717733 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19
19 14731175 14731186 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 19Link to Ensembl Genome Browser on chromosome 19

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (912 nt):
ATGGAATCCGTCACCTTTGAGGATGTGGCCGTGGAGTTCATCCAGGAGTGGGCATTGCTGGACAGCGCAC
GGAGGAGCCTGTGCAAATACAGGATGCTTGACCAGTGCAGGACCCTGGCCTCCAGGGGAACTCCACCATG
CAAACCCAGTTGTGTCTCCCAGCTGGGGCAAAGAGCAGAGCCAAAGGCAACAGAACGAGGGATTCTCCGT
GCCACAGGTGTTGCCTGGGAATCTCAACTTAAACCCGAAGAGTTGCCTTCTATGCAGGATCTTTTGGAAG
AAGCATCCTCCAGGGACATGCAAATGGGGCCGGGGCTGTTCCTGAGGATGCAGCTGGTGCCCTCCATAGA
AGAGAGGGAGACACCATTGACTCGAGAGGACCGGCCAGCTCTCCAGGAGCCGCCTTGGTCTCTGGGATGC
ACGGGACTGAAGGCCGCTATGCAGATTCAGAGGGTGGTGATACCAGTGCCTACTCTGGGCCACCGCAACC
CATGGGTGGCCAGGGATTCTGCTGTGCCTGCACGTGACCCTGCCTGGCTTCAGGAGGACAAAGTGGAGGA
AGAAGCTATGGCTCCTGGGCTGCCAACCGCCTGTTCACAGGAACCAGTCACCTTTGCAGATGTGGCTGTG
GTGTTCACCCCAGAAGAATGGGTGTTTCTGGACTCTACTCAGAGGAGCCTGTATAGAGATGTGATGCTGG
AGAACTACAGGAACCTGGCCTCTGTGGCTGATCAACTGTGCAAACCCAATGCGTTGTCTTATTTGGAAGA
AAGAGGAGAGCAGTGGACCACTGACAGGGGCGTCCTCTCAGACACCTGTGCAGAACCTCAGTGTCAACCC
CAAGAGGCAATTCCTAGCCAAGATACTTTTACAGAGATCCTGTCCATTGATGTGAAAGGGCCACCCAACT
AA

Translation (303 aa):
MESVTFEDVAVEFIQEWALLDSARRSLCKYRMLDQCRTLASRGTPPCKPSCVSQLGQRAEPKATERGILR
ATGVAWESQLKPEELPSMQDLLEEASSRDMQMGPGLFLRMQLVPSIEERETPLTREDRPALQEPPWSLGC
TGLKAAMQIQRVVIPVPTLGHRNPWVARDSAVPARDPAWLQEDKVEEEAMAPGLPTACSQEPVTFADVAV
VFTPEEWVFLDSTQRSLYRDVMLENYRNLASVADQLCKPNALSYLEERGEQWTTDRGVLSDTCAEPQCQP
QEAIPSQDTFTEILSIDVKGPPN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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