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Report for CCDS58621.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
58621.1 Public Homo sapiens 18 ARK2C 24 110 108 CCDS HistoryNCBI Gene:494470Re-query CCDS DB by CCDS ID:58621.1Re-query CCDS DB by GeneID:494470See the combined annotation on chromosome 18 in Sequence Viewer

Public since: CCDS release 11, NCBI annotation release 103, Ensembl annotation release 68

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 58621.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000543885.2 ENSP00000444285.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000543885.2Link to Ensembl Protein Viewer:ENSP00000444285.1Re-query CCDS DB by Nucleotide ID:ENST00000543885Re-query CCDS DB by Protein ID:ENSP00000444285
Original member Current member NCBI NM_001256758.1 NP_001243687.1 Accepted alive Link to Nucleotide Sequence:NM_001256758.1Link to Protein Sequence:NP_001243687.1Re-query CCDS DB by Nucleotide ID:NM_001256758Re-query CCDS DB by Protein ID:NP_001243687Link to BLAST:NP_001243687.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001243687.1 154 Q6ZSG1-2 154 100% 0 0

Chromosomal Locations for CCDS 58621.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 18 (NC_000018.10)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18See the combined annotation on chromosome 18 in Sequence Viewer

Chromosome Start Stop Links
18 46447654 46447692 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 46450296 46450400 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 46450704 46450799 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 46455974 46456080 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18
18 46456519 46456636 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 18Link to Ensembl Genome Browser on chromosome 18

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (465 nt):
ATGCACCACTTTCCCAGAAACTCCTCCTCCACACAGATGGTCGTCCATGAAATCCGAAACTACCCTTACC
CTCAGCTTCACTTCCTTGCTCTCCAGGGACTAAATCCCAGCAGACACACCTCCGCCGTACGGGAGAGCTA
TGAGGAGCTGCTGCAGCTCGAGGACAGGTTGGGTAATGTGACTCGGGGAGCTGTACAGAACACCATTGAG
AGGTTCACCTTCCCCCACAAGTATAAGAAGCGAAGACCCCAGGATGGCAAGGGCAAGAAGGATGAGGGGG
AGGAGTCAGACACAGATGAGAAATGCACAATTTGTCTGTCTATGCTGGAAGATGGAGAAGATGTGAGACG
CCTACCCTGTATGCATCTCTTTCACCAACTGTGCGTGGACCAGTGGCTCGCCATGAGCAAGAAATGCCCC
ATCTGCCGAGTGGACATTGAGACACAACTGGGAGCCGACAGCTGA

Translation (154 aa):
MHHFPRNSSSTQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE
RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCP
ICRVDIETQLGADS


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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