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Report for CCDS86656.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
86656.1 Public Homo sapiens 17 METRNL 24 110 108 CCDS HistoryNCBI Gene:284207Re-query CCDS DB by CCDS ID:86656.1Re-query CCDS DB by GeneID:284207See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 22, NCBI annotation release 109, Ensembl annotation release 92

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 86656.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000570778.5 ENSP00000458566.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000570778.5Link to Ensembl Protein Viewer:ENSP00000458566.1Re-query CCDS DB by Nucleotide ID:ENST00000570778Re-query CCDS DB by Protein ID:ENSP00000458566
Original member Current member EBI ENST00000571814.1 ENSP00000460798.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000571814.1Link to Ensembl Protein Viewer:ENSP00000460798.1Re-query CCDS DB by Nucleotide ID:ENST00000571814Re-query CCDS DB by Protein ID:ENSP00000460798
Original member Current member NCBI NM_001363853.2 NP_001350782.1 Accepted alive Link to Nucleotide Sequence:NM_001363853.2Link to Protein Sequence:NP_001350782.1Re-query CCDS DB by Nucleotide ID:NM_001363853Re-query CCDS DB by Protein ID:NP_001350782Link to BLAST:NP_001350782.1

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_001350782.1 229 Q641Q3-2 229 100% 0 0

Chromosomal Locations for CCDS 86656.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 83085014 83085323 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 83093167 83093226 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 83094256 83094575 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (690 nt):
ATGTACCCAACAGGTGCTCTCATCGTTAACCTGCGGCCCAACACCTTCTCGCCTGCCCGGCACCTGACCG
TGTGCATCAGGTCCTTCACGGACTCCTCGGGGGCCAATATTTATTTGGAAAAAACTGGAGAACTGAGACT
GCTGGTACCAGACGGGGACGGCAGGCCCGGCCGGGTGCAGTGTTTTGGCCTGGAGCAGGGCGGCCTGTTC
GTGGAGGCCACGCCGCAGCAGGATATCGGCCGGAGGACCACAGGCTTCCAGTACGAGCTGGTTAGGAGGC
ACAGGGCGTCGGACCTGCACGAGCTGTCTGCGCCGTGCCGTCCCTGCAGTGACACCGAGGTGCTCCTAGC
CGTCTGCACCAGCGACTTCGCCGTTCGAGGCTCCATCCAGCAAGTTACCCACGAGCCTGAGCGGCAGGAC
TCAGCCATCCACCTGCGCGTGAGCAGACTCTATCGGCAGAAAAGCAGGGTCTTCGAGCCGGTGCCCGAGG
GTGACGGCCACTGGCAGGGGCGCGTCAGGACGCTGCTGGAGTGTGGCGTGCGGCCGGGGCATGGCGACTT
CCTCTTCACTGGCCACATGCACTTCGGGGAGGCGCGGCTCGGCTGTGCCCCACGCTTCAAGGACTTCCAG
AGGATGTACAGGGATGCCCAGGAGAGGGGGCTGAACCCTTGTGAGGTTGGCACGGACTGA

Translation (229 aa):
MYPTGALIVNLRPNTFSPARHLTVCIRSFTDSSGANIYLEKTGELRLLVPDGDGRPGRVQCFGLEQGGLF
VEATPQQDIGRRTTGFQYELVRRHRASDLHELSAPCRPCSDTEVLLAVCTSDFAVRGSIQQVTHEPERQD
SAIHLRVSRLYRQKSRVFEPVPEGDGHWQGRVRTLLECGVRPGHGDFLFTGHMHFGEARLGCAPRFKDFQ
RMYRDAQERGLNPCEVGTD


Links Key
 Links to:   History report
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  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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