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Report for CCDS92387.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
92387.1 Public Homo sapiens 17 GPR142 24 110 108 CCDS HistoryNCBI Gene:350383Re-query CCDS DB by CCDS ID:92387.1Re-query CCDS DB by GeneID:350383See the combined annotation on chromosome 17 in Sequence Viewer

Public since: CCDS release 24, NCBI annotation release 110, Ensembl annotation release 108

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 92387.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000582579.6 ENSP00000464632.2 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000582579.6Link to Ensembl Protein Viewer:ENSP00000464632.2Re-query CCDS DB by Nucleotide ID:ENST00000582579Re-query CCDS DB by Protein ID:ENSP00000464632
Original member Current member NCBI NM_001331076.1 NP_001318005.1 MANE Select Accepted alive Link to Nucleotide Sequence:NM_001331076.1Link to Protein Sequence:NP_001318005.1Re-query CCDS DB by Nucleotide ID:NM_001331076Re-query CCDS DB by Protein ID:NP_001318005Link to BLAST:NP_001318005.1
Original member Current member NCBI NM_001331077.1 NP_001318006.1 Accepted alive Link to Nucleotide Sequence:NM_001331077.1Link to Protein Sequence:NP_001318006.1Re-query CCDS DB by Nucleotide ID:NM_001331077Re-query CCDS DB by Protein ID:NP_001318006Link to BLAST:NP_001318006.1

Chromosomal Locations for CCDS 92387.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 17 (NC_000017.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17See the combined annotation on chromosome 17 in Sequence Viewer

Chromosome Start Stop Links
17 74369541 74369634 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74370521 74370679 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17
17 74371729 74372600 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 17Link to Ensembl Genome Browser on chromosome 17

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1125 nt):
ATGCTGACAGGGAGCTGCGGGGACCCTCAGAAAAAGCCACAGGTGACCCAGGACTCAGGGCCCCAGAGCA
TGGGGCTTGAGGGACGAGAGACAGCTGGCCAGCCACGAGTGACCCTGCTGCCCACGCCCCACGTCAGCGG
GCTGAGCCAGGAGTTTGAAAGCCACTGGCCAGAGATCGCAGAGAGGTCCCCGTGTGTGGCTGGCGTCATC
CCTGTCATCTACTACAGTGTCCTGCTGGGCTTGGGGCTGCCTGTCAGCCTCCTGACCGCAGTGGCCCTGG
CGCGCCTTGCCACCAGGACCAGGAGGCCCTCCTACTACTACCTTCTGGCGCTCACAGCCTCGGATATCAT
CATCCAGGTGGTCATCGTGTTCGCGGGCTTCCTCCTGCAGGGAGCAGTGCTGGCCCGCCAGGTGCCCCAG
GCTGTGGTGCGCACGGCCAACATCCTGGAGTTTGCTGCCAACCACGCCTCAGTCTGGATCGCCATCCTGC
TCACGGTTGACCGCTACACTGCCCTGTGCCACCCCCTGCACCATCGGGCCGCCTCGTCCCCAGGCCGGAC
CCGCCGGGCCATTGCTGCTGTCCTGAGTGCTGCCCTGTTGACCGGCATCCCCTTCTACTGGTGGCTGGAC
ATGTGGAGAGACACCGACTCACCCAGAACACTGGACGAGGTCCTCAAGTGGGCTCACTGTCTCACTGTCT
ATTTCATCCCTTGTGGCGTGTTCCTGGTCACCAACTCGGCCATCATCCACCGGCTACGGAGGAGGGGCCG
GAGTGGGCTGCAGCCCCGGGTGGGCAAGAGCACAGCCATCCTCCTGGGCATCACCACACTGTTCACCCTC
CTGTGGGCGCCCCGGGTCTTCGTCATGCTCTACCACATGTACGTGGCCCCTGTCCACCGGGACTGGAGGG
TCCACCTGGCCTTGGATGTGGCCAATATGGTGGCCATGCTCCACACGGCAGCCAACTTCGGCCTCTACTG
CTTTGTCAGCAAGACTTTCCGGGCCACTGTCCGACAGGTCATCCACGATGCCTACCTGCCCTGCACTTTG
GCATCACAGCCAGAGGGCATGGCGGCGAAGCCTGTGATGGAGCCTCCGGGACTCCCCACAGGGGCAGAAG
TGTAG

Translation (374 aa):
MLTGSCGDPQKKPQVTQDSGPQSMGLEGRETAGQPRVTLLPTPHVSGLSQEFESHWPEIAERSPCVAGVI
PVIYYSVLLGLGLPVSLLTAVALARLATRTRRPSYYYLLALTASDIIIQVVIVFAGFLLQGAVLARQVPQ
AVVRTANILEFAANHASVWIAILLTVDRYTALCHPLHHRAASSPGRTRRAIAAVLSAALLTGIPFYWWLD
MWRDTDSPRTLDEVLKWAHCLTVYFIPCGVFLVTNSAIIHRLRRRGRSGLQPRVGKSTAILLGITTLFTL
LWAPRVFVMLYHMYVAPVHRDWRVHLALDVANMVAMLHTAANFGLYCFVSKTFRATVRQVIHDAYLPCTL
ASQPEGMAAKPVMEPPGLPTGAEV


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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