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Report for CCDS73570.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
73570.1 Public Homo sapiens 13 RCBTB2 24 110 108 CCDS HistoryNCBI Gene:1102Re-query CCDS DB by CCDS ID:73570.1Re-query CCDS DB by GeneID:1102See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 17, NCBI annotation release 106, Ensembl annotation release 76

Review status: Provisional (this record has not been manually reviewed by the collaboration)

Sequence IDs included in CCDS 73570.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000544492.5 ENSP00000443862.1 Accepted alive Link to Ensembl Transcript Viewer:ENST00000544492.5Link to Ensembl Protein Viewer:ENSP00000443862.1Re-query CCDS DB by Nucleotide ID:ENST00000544492Re-query CCDS DB by Protein ID:ENSP00000443862
Original member Current member NCBI NM_001286832.2 NP_001273761.1 Accepted alive Link to Nucleotide Sequence:NM_001286832.2Link to Protein Sequence:NP_001273761.1Re-query CCDS DB by Nucleotide ID:NM_001286832Re-query CCDS DB by Protein ID:NP_001273761Link to BLAST:NP_001273761.1
Original member Current member NCBI NM_001352427.2 NP_001339356.1 Accepted alive Link to Nucleotide Sequence:NM_001352427.2Link to Protein Sequence:NP_001339356.1Re-query CCDS DB by Nucleotide ID:NM_001352427Re-query CCDS DB by Protein ID:NP_001339356Link to BLAST:NP_001339356.1
Original member Current member NCBI NM_001352428.2 NP_001339357.1 Accepted alive Link to Nucleotide Sequence:NM_001352428.2Link to Protein Sequence:NP_001339357.1Re-query CCDS DB by Nucleotide ID:NM_001352428Re-query CCDS DB by Protein ID:NP_001339357Link to BLAST:NP_001339357.1

Chromosomal Locations for CCDS 73570.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '-' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 48490111 48490251 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 48496191 48496321 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 48499621 48499760 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 48501742 48501868 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 48502724 48502914 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 48511770 48511873 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (834 nt):
ATGTCTGGGGTTACAACGGAAACGGGCAGCTTGGACTCGGCAACAGTGGCAACCAGCCAACCCCTTGCAG
AGTGGCAGCTTTGCAAGGCATCCGTGTCCAGAGGGATTATCGAGATTGCAGCCTGTCACTCCACACACAC
GTCTGCGGCCAAGACGCAGGGTGGGCACGTGTACATGTGGGGCCAGTGCCGGGGTCAGTCCGTGATCCTC
CCGCACCTCACCCACTTCTCCTGCACTGACGACGTGTTTGCCTGCTTTGCCACGCCCGCCGTCACGTGGC
GCCTCCTCTCCGTGGAACCTGATGACCACCTCACAGTGGCTGAGTCACTGAAGAGGGAATTTGACAACCC
GGACACTGCAGACCTGAAGTTTCTAGTTGATGGAAAGTACATTTATGCACATAAAGTCCTTCTCAAGATT
CGATGTGAGCATTTTCGTTCGTCATTGGAAGATAACGAGGATGATATTGTAGAAATGAGTGAATTTTCAT
ATCCTGTTTACCGGGCCTTCCTGGAATACCTATACACAGACAGCATCAGCCTTTCTCCTGAGGAGGCAGT
AGGACTGCTAGACTTGGCTACATTTTATAGAGAAAATCGTTTGAAAAAGCTCTGCCAACAAACTATCAAG
CAAGGCATCTGCGAGGAGAATGCCATCGCTCTGCTCTCGGCTGCGGTGAAGTATGATGCACAGGATTTAG
AAGAATTCTGCTTCAGGTTTTGCATAAACCATCTGACTGTAGTAACACAAACATCAGGTTTTGCAGAAAT
GGACCATGATCTCCTGAAGAACTTTATCAGCAAAGCAAGCAGAGTTGGAGCCTTTAAAAATTGA

Translation (277 aa):
MSGVTTETGSLDSATVATSQPLAEWQLCKASVSRGIIEIAACHSTHTSAAKTQGGHVYMWGQCRGQSVIL
PHLTHFSCTDDVFACFATPAVTWRLLSVEPDDHLTVAESLKREFDNPDTADLKFLVDGKYIYAHKVLLKI
RCEHFRSSLEDNEDDIVEMSEFSYPVYRAFLEYLYTDSISLSPEEAVGLLDLATFYRENRLKKLCQQTIK
QGICEENAIALLSAAVKYDAQDLEEFCFRFCINHLTVVTQTSGFAEMDHDLLKNFISKASRVGAFKN


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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