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Report for CCDS9379.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
9379.1 Public Homo sapiens 13 NAA16 24 110 108 CCDS HistoryNCBI Gene:79612Re-query CCDS DB by CCDS ID:9379.1Re-query CCDS DB by GeneID:79612See the combined annotation on chromosome 13 in Sequence Viewer

Public since: CCDS release 1, NCBI annotation release 35.1, Ensembl annotation release 23

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 9379.1

Original Current Source Nucleotide ID Protein ID MANE Status in CCDS Seq. Status Links
Original member Current member EBI ENST00000379406.8 ENSP00000368716.3 MANE Select Accepted alive Link to Ensembl Transcript Viewer:ENST00000379406.8Link to Ensembl Protein Viewer:ENSP00000368716.3Re-query CCDS DB by Nucleotide ID:ENST00000379406Re-query CCDS DB by Protein ID:ENSP00000368716
Original member Current member NCBI NM_024561.5 NP_078837.3 MANE Select Accepted alive Link to Nucleotide Sequence:NM_024561.5Link to Protein Sequence:NP_078837.3Re-query CCDS DB by Nucleotide ID:NM_024561Re-query CCDS DB by Protein ID:NP_078837Link to BLAST:NP_078837.3

RefSeq Length Related UniProtKB/SwissProt Length Identity Gaps Mismatches
NP_078837.3 864 Q6N069-1 864 100% 0 0

Chromosomal Locations for CCDS 9379.1

Assembly GRCh38.p14 (GCF_000001405.40)

On '+' strand of Chromosome 13 (NC_000013.11)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13See the combined annotation on chromosome 13 in Sequence Viewer

Chromosome Start Stop Links
13 41311529 41311582 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41316846 41316930 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41318806 41318910 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41320667 41320824 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41323056 41323190 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41325698 41325851 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41328724 41328843 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41331274 41331369 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41336650 41336756 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41355144 41355216 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41358304 41358473 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41358810 41358962 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41362031 41362159 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41367439 41367652 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41369090 41369283 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41372203 41372311 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41372732 41372830 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41373637 41373780 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41374742 41374839 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13
13 41375405 41375602 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 13Link to Ensembl Genome Browser on chromosome 13

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (2595 nt):
ATGCCGAACGTGCTGCTGCCGCCCAAGGAGAGCAACCTCTTCAAACGCATCTTGAAATGTTATGAACAGA
AGCAGTACAAAAATGGCCTCAAGTTTTGCAAGATGATTCTGTCGAACCCAAAATTTGCTGAACATGGAGA
GACTTTGGCTATGAAAGGATTAACACTGAACTGTTTAGGAAAAAAAGAAGAAGCTTATGAGTTTGTTCGT
AAAGGACTTCGTAATGATGTCAAGAGTCATGTCTGTTGGCATGTATATGGACTCTTGCAGCGTTCTGATA
AAAAATATGATGAAGCTATAAAATGTTACCGAAATGCCCTCAAATTAGATAAAGATAACCTGCAAATTTT
GAGGGATCTCTCACTGTTGCAGATCCAAATGAGAGACCTTGAAGGTTACCGAGAGACAAGATACCAGCTT
CTTCAGTTGCGCCCCACACAGCGTGCCTCCTGGATTGGATATGCTATTGCATACCATTTGCTGAAAGATT
ATGATATGGCCCTAAAACTGTTGGAAGAATTTAGACAAACTCAGCAAGTTCCTCCAAACAAAATAGATTA
TGAATATAGTGAATTGATATTATACCAGAATCAAGTGATGAGAGAGGCAGATCTGTTGCAGGAATCTTTG
GAACATATAGAAATGTATGAGAAACAAATATGTGATAAACTTTTGGTGGAAGAAATTAAAGGGGAAATAC
TGTTGAAATTGGGAAGATTAAAAGAAGCCAGTGAAGTGTTCAAAAACTTGATTGATCGAAATGCAGAAAA
TTGGTGTTATTATGAAGGCTTGGAAAAAGCTCTACAAATTAGCACTTTAGAAGAGAGGCTTCAAATTTAT
GAAGAAATTAGTAAGCAGCACCCCAAAGCAATTACACCCAGAAGATTACCTTTGACTCTTGTCCCAGGTG
AAAGATTTAGAGAACTAATGGATAAGTTCCTGAGGGTTAACTTCAGTAAAGGCTGCCCACCCTTGTTTAC
TACTTTGAAATCTTTATATTACAATACAGAAAAGGTTTCTATAATCCAGGAACTTGTTACTAATTATGAA
GCCTCTCTTAAAACGTGTGACTTTTTTAGCCCATATGAGAATGGGGAGAAGGAACCCCCGACAACACTAC
TCTGGGTTCAGTATTTCCTGGCACAGCACTTTGATAAACTTGGACAGTATTCTTTGGCTTTGGATTATAT
TAATGCTGCAATTGCTAGTACTCCAACTCTAATAGAATTATTCTATATGAAAGCAAAAATTTACAAGCAT
ATAGGTAATCTCAAAGAAGCTGCAAAGTGGATGGATGAAGCACAGTCTTTGGACACAGCTGATAGATTCA
TCAATTCCAAATGTGCAAAATACATGCTTCGAGCAAATATGATAAAAGAAGCAGAGGAAATGTGCTCCAA
GTTCACAAGGGAAGGAACATCTGCCATGGAAAATCTAAATGAAATGCAGTGTATGTGGTTTCAGACAGAA
TGCATTTCAGCTTATCAGCGTCTGGGGAGATACGGGGATGCCTTGAAAAAATGTCATGAAGTAGAAAGGC
ATTTTTTTGAGATAACTGATGACCAATTCGACTTCCATACATACTGCATGAGAAAGATGACCCTTCGTGC
CTATGTTGACCTTTTGAGATTAGAAGATATACTCAGAAGACATGCCTTTTATTTCAAGGCTGCTAGATCA
GCGATTGAAATATACTTGAAATTGTATGATAATCCCTTAACCAATGAAAGCAAACAACAAGAAATAAACT
CAGAAAACTTGTCAGCCAAAGAATTGAAGAAAATGCTTAGCAAGCAGAGAAGAGCTCAGAAAAAGGCTAA
ACTAGAAGAAGAAAGAAAGCATGCAGAAAGAGAACGTCAACAGAAAAATCAAAAGAAAAAAAGAGATGAA
GAAGAAGAAGAAGCCAGTGGCCTTAAGGAAGAACTTATACCTGAAAAATTAGAAAGGGTAGAAAATCCAT
TAGAGGAAGCCGTTAAGTTCCTTATACCTCTTAAGAACCTTGTTGCTGATAACATTGACACTCATCTGTT
AGCATTTGAAATATATTTTAGAAAAGGAAAGTTTCTGTTAATGCTGCAGTCTGTCAAACGAGCTTTTGCC
ATTAACAGTAATAACCCATGGTTACATGAATGTTTAATTAGATTTTCTAAATCTGTGTCTAATCATAGTA
ATCTTCCAGACATTGTGAGCAAAGTTCTATCTCAAGAAATGCAGAAAATATTTGTCAAAAAGGATTTGGA
AAGTTTTAATGAGGATTTTCTGAAACGTAACGCTACCTCTCTTCAGCATCTACTTTCAGGTGCTAAAATG
ATGTATTTTCTGGACAAGTCAAGGCAGGAGAAAGCAATTGCTATAGCCACTAGACTAGATGAAACTATAA
AAGATAAAGATGTAAAGACATTAATAAAGGTTTCTGAAGCACTGCTTGATGGCAGCTTTGGGAACTGTAG
TTCCCAATATGAAGAATATAGGATGGCCTGTCATAACCTGCTTCCTTTTACATCTGCCTTCTTGCCTGCT
GTGAATGAAGTCGACAATCCTAATGTGGCACTGAACCATACAGCTAATTATGATGTCTTGGCAAATGAAA
TTTGA

Translation (864 aa):
MPNVLLPPKESNLFKRILKCYEQKQYKNGLKFCKMILSNPKFAEHGETLAMKGLTLNCLGKKEEAYEFVR
KGLRNDVKSHVCWHVYGLLQRSDKKYDEAIKCYRNALKLDKDNLQILRDLSLLQIQMRDLEGYRETRYQL
LQLRPTQRASWIGYAIAYHLLKDYDMALKLLEEFRQTQQVPPNKIDYEYSELILYQNQVMREADLLQESL
EHIEMYEKQICDKLLVEEIKGEILLKLGRLKEASEVFKNLIDRNAENWCYYEGLEKALQISTLEERLQIY
EEISKQHPKAITPRRLPLTLVPGERFRELMDKFLRVNFSKGCPPLFTTLKSLYYNTEKVSIIQELVTNYE
ASLKTCDFFSPYENGEKEPPTTLLWVQYFLAQHFDKLGQYSLALDYINAAIASTPTLIELFYMKAKIYKH
IGNLKEAAKWMDEAQSLDTADRFINSKCAKYMLRANMIKEAEEMCSKFTREGTSAMENLNEMQCMWFQTE
CISAYQRLGRYGDALKKCHEVERHFFEITDDQFDFHTYCMRKMTLRAYVDLLRLEDILRRHAFYFKAARS
AIEIYLKLYDNPLTNESKQQEINSENLSAKELKKMLSKQRRAQKKAKLEEERKHAERERQQKNQKKKRDE
EEEEASGLKEELIPEKLERVENPLEEAVKFLIPLKNLVADNIDTHLLAFEIYFRKGKFLLMLQSVKRAFA
INSNNPWLHECLIRFSKSVSNHSNLPDIVSKVLSQEMQKIFVKKDLESFNEDFLKRNATSLQHLLSGAKM
MYFLDKSRQEKAIAIATRLDETIKDKDVKTLIKVSEALLDGSFGNCSSQYEEYRMACHNLLPFTSAFLPA
VNEVDNPNVALNHTANYDVLANEI


Links Key
 Links to:   History report
  BLAST report
  Entrez Gene
  Nucleotide report
  Protein report
 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
  Protein ID
 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
  UCSC Genome Browser
  VEGA Genome Browser

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