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Report for CCDS51372.1 (current version)

CCDS Status Species Chrom. Gene CCDS Release NCBI Annotation Release Ensembl Annotation Release Links
51372.1 Public Mus musculus 4 Zfp987 23 108 98 CCDS HistoryNCBI Gene:626316Re-query CCDS DB by CCDS ID:51372.1See the combined annotation on chromosome 4 in Sequence Viewer

Public since: CCDS release 7, NCBI annotation release 37.2, Ensembl annotation release 61

Review status: Reviewed (by RefSeq and Havana)

Sequence IDs included in CCDS 51372.1

Original Current Source Nucleotide ID Protein ID Status in CCDS Seq. Status Links
Original member Current member EBI ENSMUST00000091878.5 ENSMUSP00000089493.5 Accepted alive Link to Ensembl Transcript Viewer:ENSMUST00000091878.5Link to Ensembl Protein Viewer:ENSMUSP00000089493.5Re-query CCDS DB by Nucleotide ID:ENSMUST00000091878Re-query CCDS DB by Protein ID:ENSMUSP00000089493
Original member Current member NCBI NM_001037926.2 NP_001033015.1 Accepted alive Link to Nucleotide Sequence:NM_001037926.2Link to Protein Sequence:NP_001033015.1Re-query CCDS DB by Nucleotide ID:NM_001037926Re-query CCDS DB by Protein ID:NP_001033015Link to BLAST:NP_001033015.1

Chromosomal Locations for CCDS 51372.1

Assembly GRCm38.p6 (GCF_000001635.26)

On '+' strand of Chromosome 4 (NC_000070.6)
Genome Browser links: Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4See the combined annotation on chromosome 4 in Sequence Viewer

Chromosome Start Stop Links
4 146117880 146117909 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 146121884 146122010 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4
4 146124157 146125901 Link to NCBI NucleotideLink to UCSC Genome Browser on chromosome 4Link to Ensembl Genome Browser on chromosome 4

CCDS Sequence Data
Blue highlighting indicates alternating exons.
Red highlighting indicates amino acids encoded across a splice junction.
 
Mouse over the nucleotide or protein sequence below and click on the highlighted codon or residue to select the pair.

Nucleotide Sequence (1902 nt):
ATGAGTGTGTGTCTGGTAAATACACCACAGGGTCTGTTAACTTTCAAGGACGTGGCCTTGGACTTCTCAC
TG
GAGGAATGGGAATGTCTCAGTTTTGCTCAGAGGTCATTGTACATGGATGTGATGTTGGAGAATTACAA
C
AATCTGTTGTTTGTGGAAAATCATTGCATACGTGGAAAGAATGGGAAGGTATTGGATCAAGACAGCCAG
TAC
ATTGTCCATGAACACATGAATATTCAAGAGAAGTCTTCTAAATGGGACAAGCTTAGCAATGTCATTC
TT
GAATCCCTCCAGTGTACACCTTACAAAACTAATCACAGCTCTGATGCTCTTCAATTCTCGAACCAAAA
A
AGACTTAAGCCCAGGAACACTAAAGAAGTTTGCAAATACAATGACTCTGTAAACAGTTTAAGTTTGTTT
TCT
ACCATTAGTCTCAATCAAGGAATTAACATGCAGAAGAAAAAACACAACCGAAATGCAGAATTAGACA
AG
ATTTTTGTTTCTAAACATAAAGTCATGGTGAAAAAAGACAATATTGCAGGGAACCCTTACAAATGTAG
T
GAATTTCACAAATATCTTACCCAGAGAGAAAACCTACAAAGTCAGCAGAGAATTTATCATGGAAAGAAA
CCT
TACAAAAGTAGTAAAAGTGACAAATGCTTTACCCATCAGATCCATCTTAGTATTCATCAGGAAATTC
AT
ACAGAAGAGAAAATTTACAAATGTAGTGAATGTGACAAATGTTTTAAAAACAAATTCAATCTTACTAT
G
CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAAACAA
TCC
AATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAAT
GC
TTTACCCAAGAATCCTATCTTAGTATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAG
T
GAATGTGGCAAATGCTTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCT
TACAAATGCAGTGAATGTGACAAATGCTTTACCCAACAATCCCATCTTAGTATTCATCAGAGAATTC
AT
ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCCAACAATCCAATCTTAGTAT
T
CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGGCAAATGCTTTACTGAAAAA
AGC
AGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGGCAAAT
GC
TTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAA
T
GAATGTGGCAAATGCTTTACTGAAAAAAGCAGTCTGAGAATTCATCAGAGAATTCATACAGGAGAGAAA
CCT
TACAAATGCAGTGAATGTGGCAAATGCTTTACTGTAAAAAGCAGTCTGAGAATTCATCAGAAAATTC
AT
ACAGGAGAGAAACCTTACAAATGCAGTGAATGTGACAAATGCTTTACCAAACCATCCCATCTTAGTAT
T
CATCAGAGAATTCATACAGGAGAGAAACCTTACAAATGCAGTGAATGTGAAAAATGCTTTAATGAAAAA
AAC
ATTCTGAAAATTCATCAGAGAATTCATACAGGAGAGAGACCTTACAAATGTAGTGAATGTGACAAAT
GC
TTTTCCCGAAAATTCCATCTTGGTATTCATCAGAGAATTCATACAGGAAAGAAACCTTACAAATGTAG
T
GAATGTGACAAATGCTTTACCCAGAAATCCCATCTTAGTATTCATCAGAAAATTCATACAGGAGAGAAA
CCT
TACAAATAG


Translation (633 aa):
MSVCLVNTPQGLLTFKDVALDFSLEEWECLSFAQRSLYMDVMLENYNNLLFVENHCIRGKNGKVLDQDSQ
Y
IVHEHMNIQEKSSKWDKLSNVILESLQCTPYKTNHSSDALQFSNQKRLKPRNTKEVCKYNDSVNSLSLF
S
TISLNQGINMQKKKHNRNAELDKIFVSKHKVMVKKDNIAGNPYKCSEFHKYLTQRENLQSQQRIYHGKK
P
YKSSKSDKCFTHQIHLSIHQEIHTEEKIYKCSECDKCFKNKFNLTMHQRIHTGEKPYKCSECDKCFTKQ
S
NLSIHQRIHTGEKPYKCSECDKCFTQESYLSIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEK
P
YKCSECDKCFTQQSHLSIHQRIHTGEKPYKCSECDKCFTQQSNLSIHQRIHTGEKPYKCSECGKCFTEK
S
SLRIHQRIHTGEKPYKCSECGKCFTEKSSLRIHQRIHTGEKPYKCNECGKCFTEKSSLRIHQRIHTGEK
P
YKCSECGKCFTVKSSLRIHQKIHTGEKPYKCSECDKCFTKPSHLSIHQRIHTGEKPYKCSECEKCFNEK
N
ILKIHQRIHTGERPYKCSECDKCFSRKFHLGIHQRIHTGKKPYKCSECDKCFTQKSHLSIHQKIHTGEK
P
YK




Links Key
 Links to:   History report
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 Re-query CCDS DB by:   CCDS ID
  Gene ID
  Nucleotide ID
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 Genome Browser Links:   Ensembl Genome Browser
  NCBI Sequence Viewer
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  VEGA Genome Browser